Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1558g00008 ATGTCGAGTTTGTCAGCCATGAACCTCTCCTACAATAATTTGGAGGGTCCAGTTCCTGAAGGTGGCATATTCAACTCTTCTCATCCCCTGGATTTGAGCAACAACAAGGATTTATGTGGAAATATTAGAGGTTTGCATCCTTGTAATGTCTCTCTCACTAAACCTCATGGGGGATCAAGGAACAAAAACAAGCTTGTAATCCCTATTGTTGCTTCCTTGGGAGGTGTTCTTTTTCTTTCTTTGGTGTTAGTTGGGATTCTTTTCTTTTGCTGTAAGAGAAAATCAAGAGCTCCAAGACAAAGAAATTCATTCAGAAGACCGAATCCATTTTCAATTTGGTACTTCAATGGCAGAGTTGTGTATAGAGACATCATCGAAGCTACCAACAATTTTGACAACCAGTATTGCATTGGAGAAGGAGCACTGGGAAAAGTTTATAAGGCGGAGATGCAAGGTGGTCAAGTATTTGCTGTAAAAAAGTTGAAGTGTGATGCAGACAACTTAGACGTTGACAGTATAAAAACGTTTCAGAATGAGGTAGAAGCCATGAAAGAAACACGGCACAGAAACATTGTCAAGCTATACGGATTCTGCTCTCAAGGGATGAACACATTTTTAATTTTTGAGTATATGGATAGAGGAAACTTAGAAGACATGCTGAGAGATGAGAAGGATGCATCAGAACTAGATTGGCCCAAGAGGGTTGTCATTATCAAAGGTGTAGCAAGCGCTTTGTCCTATATGCATCACGATTGTGTTCCACCTTTAATTCATAGAGACATATCAAGCAAGAACGTTTTGCTGTCCTCCAATCTCGAAGCTCGTGTCTCAGATTTTGGAACTGCAAGGTTTCTGAAGCCTGACTCCCCCATTTGGACATCATTTGCGGGCACATATGGCTATGCTGCTCCAGAGCTTGCTTACACAATGGCAGTGACTGAGAAATGTGATGTGTTCAGCTTTGGCGTTTTGGCTTTTGAGGTTCTTACGGGTAACCACCCCGGTGACCTTGTTTCCTACCTACAAACTTGTAGTGAACAAAAAATAAACTTGAAAGAGATTTTGGACCCTCGTGTCTCGTCTCCTATGAAGAACCACATTCCAAAGGAATTGGATTTGGTTGCCAACGTAGCTCTTTCATGTTTAAAGACAAATCCTCAATCTCGACCAACTATGCGAAACATAGCTCAGTTGCTTGAAATGGAGACTGCACACATAAGATAG 1224 0.4134 MSSLSAMNLSYNNLEGPVPEGGIFNSSHPLDLSNNKDLCGNIRGLHPCNVSLTKPHGGSRNKNKLVIPIVASLGGVLFLSLVLVGILFFCCKRKSRAPRQRNSFRRPNPFSIWYFNGRVVYRDIIEATNNFDNQYCIGEGALGKVYKAEMQGGQVFAVKKLKCDADNLDVDSIKTFQNEVEAMKETRHRNIVKLYGFCSQGMNTFLIFEYMDRGNLEDMLRDEKDASELDWPKRVVIIKGVASALSYMHHDCVPPLIHRDISSKNVLLSSNLEARVSDFGTARFLKPDSPIWTSFAGTYGYAAPELAYTMAVTEKCDVFSFGVLAFEVLTGNHPGDLVSYLQTCSEQKINLKEILDPRVSSPMKNHIPKELDLVANVALSCLKTNPQSRPTMRNIAQLLEMETAHIR 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1558g00008 407 FunFam Leucine-rich repeat receptor protein kinase MSP1 93 210 - -
Mupr1558g00008 407 ProSitePatterns Tyrosine protein kinases specific active-site signature. 256 268 IPR008266 GO:0004672|GO:0006468
Mupr1558g00008 407 Gene3D Transferase(Phosphotransferase) domain 1 211 406 - -
Mupr1558g00008 407 Gene3D Ribonuclease Inhibitor 1 54 IPR032675 -
Mupr1558g00008 407 Gene3D Phosphorylase Kinase; domain 1 91 210 - -
Mupr1558g00008 407 ProSiteProfiles Protein kinase domain profile. 131 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1558g00008 407 PANTHER LEUCINE RICH REPEAT KINASE 2 1 402 - -
Mupr1558g00008 407 SUPERFAMILY Protein kinase-like (PK-like) 104 401 IPR011009 -
Mupr1558g00008 407 Pfam Protein kinase domain 136 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1558g00008 407 FunFam MDIS1-interacting receptor like kinase 2 211 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1558g00008 Mupr-Chr1558 34838 36138 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1558g00008 1 304 Receptor kinase-like Gene Family AT4G08850 44.984 4.66e-85 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mupr1558g00008 Pkinase 5.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1558g00008 - - gmx:100814345 695.271