Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15586g00001 ATGAGCGGAAGTGGCAGAAAGACCTCTTCAAAGTGGGATTCGAGAGATGAACCTGAAATTGCATCTTATAGTACTGCTAGTAGCAATAGTTCCAAGTGGTCCTCTTTGGAAGGAAATGATATGTTAAAACCCATGATGGGATTTTCATGCAAGGAACCTTTTTCTGGAGGCAGAGGTTCAAATAAGGATGATATTATGGATAGAGATTACAAAGTTTTGGATGCAACAGATGCACGGGACACTGATGGAAGTTACAGCATGAAAATGTCTCCAGGGTTTGAGGATTGTAAAAATAACAAGTACAATCAATCCCCCAAAAATGGTTGCAATAGGTCAGTCAGGAGTAACCGGAGCAGAAGTAGGAGCCGGAGCCCTCCACATAGTTATGGGTGGGATTCAGGAGTCAATGACAGATACAGAATGAGGGCTGGAGGATTGACACAACCATGTAGAGATTTTGCTGCTGGGAAATGCAGAAGAGGCAGCCATTGCCATTTCGTTCACCATAACATTCAAAATTATGATGATAGCTGGGAAAGTAGACACAGGCAAGATGGAACTCCCAGATATTCTGCTCCCCACGAGAGTGGGGACTATTCTCGTACAAGTGGAAGATCTAATGGAACTTGTATCAATTATGCAAAGGGAAGGTGTAGAATGGGAGCATCATGCAAGTATGTGCACCATGACAGTGCTGATCAGTTCAGTAAAGTTTCTGTGGATGAATCAACTAGGGAAAGGGAAATTGATAGAAGGCGCACGGAGAGTTCTTTCGAGCAGGGTGGTCGACACAGTATAAACCAGAATGGTGATATTCCTTGCAAATTTTTTGCATTTGGGAATTGTCGAAATGGTAAACATTGTAGGTTTTCTCATGATAGGCAAGCATGTGGGAGCCTGAATAGAAGATTCAGGGATGATATTGATAGGTCAAGGAGCAGTCAAGGTGGAGATCAGGCTTTAGATAGGCCAAAATTGAGTGAAGTTAGTCCCAATGGAGGGCTAAGAGATGATAGGTGGGGTTTAGATGGTAGTATGGCTGATGTAGATAGAGTTTGGGATGGTTCCAAACAGAATGATTTAGCTGTTGTCTCTGATATAGCAAAGCTGATCAAGGATAACAAAAATGGAATTATGGGCGCCTCAGAACCTGAATTCACTGCTTGGCCAATTAGTGATGGATGGGACCATAGCTTAGATAAGAACAGAGTGCATGGTGAATCACCATTTTCAAGTGATATGAAGGAAGCCAATTGGACAGCAAAAAATGATAGTGCTAACATTCACACTTCCCAGTCAATAGGCGCAGACATTTGGCCTGGTAATGAAAAAATGTCTCCTGATTGGAATTATGGTGCAGGATCTTCCGCCCATACAAAAGAAGAGCATGGGCAGCAGACTAAGCAACAAGTTGCTCCAGTGACACAAACAAATCTGCTGATTTACATTTTACACATCAACCTAAATTTCTGCACCATTTTACCAGGACATGTATTTCATCAGAATGTGAATGCTTTGCATTCTTCAAGCTGTCAAGCAGTTGGACAGAGTCAAGTAGCAGCTTCCATTGTTCCTCCAAGAGTGAGAACTGTTGAAGGTATGCAGAACCAGGAAGTCTCTGCTGAGACAAAATACATTGTTGAGCCAAATATCATGGATGTAAACCTATCACAAGTTGGTTCAAGAAATCCTCCAACTCAGAACATGGTAAGCAAAGAGCAACTAGCTCAATTTACTAGCCTATCAGCCTCTCTGGCACAAATCATTGGTTCAGGTCTGCAGCTCCCACAACTTTATGCTTCTTCTATTTCTCTAGATGCAAAGGATACTACTCCCTTCCTAAGCAAAACTGAAGGGTCTGGTAATCCCGTTTCCATAACGTTAATCAAGCCAGATCCTGCTGTTGGACACCAGAAGCTGTGTGATCCAATATGTAATAATAGGGATCCAAAGAATGCTAATGCAAATGGGGTGTCCCCTACCTTTTCTCCAAGTAAAAAATTTCCTAAAGATACAGTAGAAATTCCATCACTGTTATCCAAGTTGAGACAACATTTTGATGATTCTAAGTCTGCCTTTTCGGAAGAACAACATGCCAAGAGTGAACATTCAGTTCAGTTGCAGAAAGGTGAAAACGTTGAGGTTAATAAGGAGAACAACAAAGTGGTAGCTGAAGAAAAGCAAAGTTCTCCATGTGAAAATAAAATTACAGAAGAGAATGGTCCTTTGGAAAACTTGGACCAAAACAGTGGACCTGATGAGGCCAAGAAAATGAAGGACATGAAGGGGGTTCGTGCATTTAAATTTTCATTGGTTGAGTTCGTTAAGGAGCTTTTGAAACCAACATGGAAAGATGGTAAAATCACCAAAGAAGATTATAAAGCTATTGTGAAGAAAGTTACTGACAAAGTAACTGGTACAGTGCAGCGGGCACATTTTCCTCAGACACAAGAGAAAATTGACCGCTATTTATCATTATCGAAACCAAAGCTTAACAAACTAATACAGGTTAGTGATGGTTCTCTTACACATTTCCTTCAGATGTATGAAGAATTCCAAATTCTGTTTCCCATTTAA 2577 0.4109 MSGSGRKTSSKWDSRDEPEIASYSTASSNSSKWSSLEGNDMLKPMMGFSCKEPFSGGRGSNKDDIMDRDYKVLDATDARDTDGSYSMKMSPGFEDCKNNKYNQSPKNGCNRSVRSNRSRSRSRSPPHSYGWDSGVNDRYRMRAGGLTQPCRDFAAGKCRRGSHCHFVHHNIQNYDDSWESRHRQDGTPRYSAPHESGDYSRTSGRSNGTCINYAKGRCRMGASCKYVHHDSADQFSKVSVDESTREREIDRRRTESSFEQGGRHSINQNGDIPCKFFAFGNCRNGKHCRFSHDRQACGSLNRRFRDDIDRSRSSQGGDQALDRPKLSEVSPNGGLRDDRWGLDGSMADVDRVWDGSKQNDLAVVSDIAKLIKDNKNGIMGASEPEFTAWPISDGWDHSLDKNRVHGESPFSSDMKEANWTAKNDSANIHTSQSIGADIWPGNEKMSPDWNYGAGSSAHTKEEHGQQTKQQVAPVTQTNLLIYILHINLNFCTILPGHVFHQNVNALHSSSCQAVGQSQVAASIVPPRVRTVEGMQNQEVSAETKYIVEPNIMDVNLSQVGSRNPPTQNMVSKEQLAQFTSLSASLAQIIGSGLQLPQLYASSISLDAKDTTPFLSKTEGSGNPVSITLIKPDPAVGHQKLCDPICNNRDPKNANANGVSPTFSPSKKFPKDTVEIPSLLSKLRQHFDDSKSAFSEEQHAKSEHSVQLQKGENVEVNKENNKVVAEEKQSSPCENKITEENGPLENLDQNSGPDEAKKMKDMKGVRAFKFSLVEFVKELLKPTWKDGKITKEDYKAIVKKVTDKVTGTVQRAHFPQTQEKIDRYLSLSKPKLNKLIQVSDGSLTHFLQMYEEFQILFPI 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15586g00001 858 MobiDBLite consensus disorder prediction 648 669 - -
Mupr15586g00001 858 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 1 836 - -
Mupr15586g00001 858 MobiDBLite consensus disorder prediction 238 259 - -
Mupr15586g00001 858 MobiDBLite consensus disorder prediction 649 666 - -
Mupr15586g00001 858 ProSiteProfiles Zinc finger C3H1-type profile. 144 172 IPR000571 GO:0046872
Mupr15586g00001 858 MobiDBLite consensus disorder prediction 92 135 - -
Mupr15586g00001 858 Gene3D - 145 244 - -
Mupr15586g00001 858 MobiDBLite consensus disorder prediction 689 707 - -
Mupr15586g00001 858 MobiDBLite consensus disorder prediction 238 265 - -
Mupr15586g00001 858 Pfam RNA-binding, Nab2-type zinc finger 210 228 - -
Mupr15586g00001 858 Pfam RNA-binding, Nab2-type zinc finger 149 168 - -
Mupr15586g00001 858 SMART c3hfinal6 206 230 IPR000571 GO:0046872
Mupr15586g00001 858 SMART c3hfinal6 268 294 IPR000571 GO:0046872
Mupr15586g00001 858 SMART c3hfinal6 144 170 IPR000571 GO:0046872
Mupr15586g00001 858 MobiDBLite consensus disorder prediction 178 203 - -
Mupr15586g00001 858 MobiDBLite consensus disorder prediction 20 37 - -
Mupr15586g00001 858 MobiDBLite consensus disorder prediction 689 756 - -
Mupr15586g00001 858 MobiDBLite consensus disorder prediction 308 341 - -
Mupr15586g00001 858 MobiDBLite consensus disorder prediction 1 65 - -
Mupr15586g00001 858 ProSiteProfiles Zinc finger C3H1-type profile. 268 295 IPR000571 GO:0046872
Mupr15586g00001 858 ProSiteProfiles Zinc finger C3H1-type profile. 204 231 IPR000571 GO:0046872
Mupr15586g00001 858 Pfam CCCH-type zinc finger 273 293 IPR041367 -
Mupr15586g00001 858 Gene3D - 266 333 - -
Mupr15586g00001 858 MobiDBLite consensus disorder prediction 96 115 - -
Mupr15586g00001 858 SUPERFAMILY CCCH zinc finger 271 293 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15586g00001 Mupr-Chr15586 11712 15596 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mupr15586g00001 zf-CCCH_4 5.3e-06 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15586g00001 - K22909 gmx:100783856 933.71