Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15578g00003 ATGGGAAGGTCCCCTTGCTGTGAGAAAGCTCACACAAACAAAGGTGCATGGACCAAAGAAGAAGATGACAGACTCATATCTTATATTCGAGCTCACGGCGAGGGCTGCTGGCGCTCCCTCCCCAAAGCCGCCGGCCTCCTCCGCTGCGGCAAGAGCTGCCGTCTCCGGTGGATCAACTACCTCCGCCCCGACCTCAAAAGAGGCAACTTCACCGAAGAAGAGGATGAACTCATCATCAAACTCCACAGTCTCCTCGGTAACAAGTGGTCCCTGATAGCTGGAAGATTGCCCGGGAGAACAGACAATGAAATAAAGAACTACTGGAACACTCACATAAGAAGGAAACTTCTGAACAGAGGAATCGACCCTGCAACTCACAGGCCTCTTAACGAAGCTGCTACTACTGTTGCAACTTCTACTGCCACTGCCACCAATATATCTTTTGTTAAACAAGAACAAGAAACGAGTTCAAGCAACGGTGTTAAAGGGTCGATGATGTTAGAAAGGTGCCCTGACTTGAACCTCGAGCTAACCATTAGTCCTCCTCGGCAACAACAACAACAACAAACTGAGAAGAGCCTTTGCTTCGTTTGCAGTTTGGGTCTGCTGAACAGCAAGGATTGCAGCTGTAACGCTGCCAACACTCCCACTGTCAACAACACTCCTTCTGCTGCCTATGATTTCTTGGGCTTGAAAATGAAAACAAAAGGGGTTTGGGATTGCACCACCTTGGAAATGAAATGA 744 0.4879 MGRSPCCEKAHTNKGAWTKEEDDRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLNRGIDPATHRPLNEAATTVATSTATATNISFVKQEQETSSSNGVKGSMMLERCPDLNLELTISPPRQQQQQQTEKSLCFVCSLGLLNSKDCSCNAANTPTVNNTPSAAYDFLGLKMKTKGVWDCTTLEMK 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15578g00003 247 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 187 - -
Mupr15578g00003 247 CDD SANT 69 112 IPR001005 -
Mupr15578g00003 247 Gene3D - 68 137 - -
Mupr15578g00003 247 CDD SANT 16 61 IPR001005 -
Mupr15578g00003 247 SMART sant 66 114 IPR001005 -
Mupr15578g00003 247 SMART sant 13 63 IPR001005 -
Mupr15578g00003 247 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mupr15578g00003 247 FunFam MYB-related transcription factor 13 66 - -
Mupr15578g00003 247 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mupr15578g00003 247 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Mupr15578g00003 247 Gene3D - 14 66 - -
Mupr15578g00003 247 FunFam Myb transcription factor 68 137 - -
Mupr15578g00003 247 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mupr15578g00003 247 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mupr15578g00003 247 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Mupr15578g00003 247 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15578g00003 Mupr-Chr15578 27875 28955 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15578g00003 1 247 MYB Transcription Factor Family AT4G38620 60.284 1.64e-109 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr15578g00003 Myb_DNA-binding 1.9e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15578g00003 K09422 - gmx:780553 414.075