Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1556g00007 ATGGGTGTCGCGCGTTTTTTCCATGACATTCTAGGATTGCCCGTGTTGGAACTCGCTACAATATGCGTGAACCTGACTTTTGTTCTTTTGTTTCTCTTTGTTGTCTCGGTGAGGCGTGTTCTTGTGTACGAGGGTGGATTTCGATTTTGTAAGGATGGAAACACTGGCAATCCTAGCCCAATTTGTAGTGTCATTGATGCAGAAGGGCGTGGCGTTAGAATCGGTGTCGTGTTCAAGTTGTCAGTGCTGTGTTGTTTCTATGTTTTGTTTGTGCATGTTTTGGTGTTGGGGTTTGAAGGAGGTGCTTTGATCTGGGGTGAGGCTAATGGGAAGGCTGACGTGGATTTGTCTCTTCTTTGTGTGCCTGCTGCGCAGGGTTTGGCTTGGTTTGTCTTGAGTTTCTCGGCCCTGTATTGCAAGTTCAAGGTGTCGGAGAGGTTTCCATTTTTGTTGAGAGTTTGGTGGTTTTTGTCCTTCGTTATTTGCTTGTGTACTTTATATGTTGATGGGAGGGAATTTTGGGTGGAGGGTTCCAAACATTTGAGTTCTCTTGCTGTTGCAAATTTTGCTGTTACACCAGCTCTTGCATTTTTGTGTGTGGTTGCGATTAGGGGTGGTACTGGTATAATAGTTTGTGGGAACAATGATCTTCAAGAGCCATTGCTTGTTGAGGAGGAACCAGGGTGTCTCACAATTACTCCTTATAGGGATGCTGGACTTTTTAGCTTGGCTACTCTTTCTTGGCTGAATCCACTTCTTTCCATTGGTGCAAAGAGACCGCTTGAGCTTAAGGACATTCCACTTGTTGCACCAAGAGATAGAGCCAAGACTAGTTACAAGGTTTTGAATTCTAATTGGGAGAGATTAAAGGTTGAAAATGACAATCCCTCTAAGCAACCTTCATTAGCTTGGGCGATTCTCAAGTCATTTTGGAAGGAAGCAGCTTTGAATGCTATCTTTGCTGGTGTGAATACTTTGGTGTCATATGTAGGTCCATACATGATAAGTTACTTTGTGGATTACTTGGGTGGCAGGGAGACTTTCCCCCATGAGGGGTATATCCTTGCTGGTATATTCTTTGTGGCAAAGCTTGTGGAGACTGTGACAACTAGGCAGTGGTACCTAGGTGTGGATATCTTGGGTATGCATGTTAGGTCAGCTCTAACTGCAATGGTATATAAGAAGGGACTCAGACTCTCAAGCTCAGCCAAGCAAAGTCACACAAGTGGGGAGATTGTCAACTACATGGCTGTTGATGTTCAGAGGGTAGGGGACTACTCTTGGTACCTTCATGACATGTGGATGCTTCCTCTGCAGATTGCTCTTGCCCTTGTGATTTTGTATAAGAATGTTGGAATTGCTTCTCTTGCAACATTGATTGCTACAATAATTTCCATTGTTGTCACTATTCCCGTGGCTAGGATACAAGAAGATTATCAGGACAAGTTGATGGCAGCTAAGGATGAAAGGATGAGAAAGACATCAGAGAGTCTTAGGAATATGAGGATTCTCAAGCTGCAAGCTTGGGAGGACAGATATAGAATGAGATTGGAGGAAATGCGTGGAGTAGAATTCAAGTGGCTAAGGAAAGCACTCTATTCTCAGGCTTTCATAACTTTCATTTTCTGGACCTCCCCTATATTTGTTTCAGCTGTTACTTTTGCTACTTCCATATTGTTGGGGGGTCAGCTCACTGCAGGTGGTGTTCTCTCTGCTCTGGCTACTTTCAGGATTCTCCAGGAACCTCTGAGGAATTTTCCTGACTTGGTGTCAACCATGGCTCAGACAAAAGTTTCTCTTGATCGCATATCTGGTTTCCTGCAGGATGAAGAGTTGCAGGAAGATGCCACTATCGTCTTACCACGTGGCATTTCTAACATGGCCATAGAAATTAAGGATGGTGTCTTCTGCTGGGACTCTTCTTTGCCTAGACCCACTCTATCAGGGATACATGTGAAAGTGGAAAGGGGGATGATTGTGGCTGTTTGTGGCATGGTTGGTTCTGGGAAGTCAAGTTTCCTTTCTTGCATTCTTGGAGAGGTTCCCAAGCTGTCTGGTGAAGTAAGAGTGTGTGGTTCTGTTGCATATGTCTCCCAATCTGCTTGGATACAGTCAGGGAATATAGAAGAAAATATCCTGTTTGGCACCCCAATGGACAAAGCAAAGTACAAAAATGTTCTTCATGCTTGTTCACTGAAAAAGGACCTTGAACTTTTCTCACATGGAGACCAAACAATCATTGGTGACAGAGGTATAAACTTAAGTGGTGGCCAGAAGCAGCGGGTTCAGCTTGCAAGAGCACTCTACCAAGATGCTGATATTTATCTCCTTGATGACCCCTTCAGTGCAGTTGATGCTCATACTGGATCAGAATTATTTAGGGAGTATGTGTTGACAGCACTAGCAGATAAAACAGTCATTTTTGTGACCCATCAAGTTGAATTTCTCCCTGCTGCCGATATGATATTGGTTCTTAGAGAAGGGCACATCATACAGGCCGGAAAATATGATGATCTTTTACAAGCAGGAACAGATTTTAATACTCTAGTTTCAGCTCACCATGAAGCAATAGAGGCTATGGATATTCCTAATCACTCGGAAGATTCAGATGAAAATATACTCTTATGTCTCATGACCAGTAAGACATCCATTTCTTCTGCCAATGATATTGAGATTTTGGCAAAGGAACTCCAAGAGGGATCATCGGATCAGAAAGTAATTAAGGAGAAAAAGAAAGTAAAACGCTCAAGAAAAAAACAGCTTGTTCAGGAAGAGGAAAGGGTTAGAGGTAGAGTTAGCATGAAGGTGTATTTGTCATACATGGCTGCAGCATACAAAGGTTTATTGATTCCTCTCATAATCATTGCACAAACATTGTTTCAGTTCCTCCAAATTGCTAGTAATTGGTGGATGGCTTGGGCAAATCCTCAAACTGAGGGAGACCAACCTAAAGTAACTCCCACAGCCCTTCTTCTTGTTTATATGGCTCTCGCTTTTGGCAGCTCATGGTTTATATTTGTAAGGGCGGTCCTCGTGGCTACATTTGGTCTAGCAGCTGCTCAGAAATTATTTTTCAACATGCTTAGAAGCATTTTCCATGCACCAATGTCTTTCTTTGATTCTACACCAGCTGGAAGGATCTTGAATCGGGTTTCAATTGATCAAAGTGTCGTGGATCTTGACATTCCTTTTAGACTTGGAGGGTTTGCTTCATCAACCATACAGCTTATTGGCATTGTTGCTGTAATGACAGATGTTACATGGCAAGTTTTGCTCCTAGTAGTCCCAATGGCTATTGTTTGTTTGTGGATGCAGAAATACTACATGGCTTCCTCAAGGGAACTGGTACGTATTGTGAGCATCCAGAAATCTCCAATTATACATCTTTTTGGTGAATCAATTGCTGGAGCAGCCACCATTAGAGGATTTGGACAAGAAAAAAGGTTCATGAAGAGGAATCTCTATCTTCTTGATTGTTTTGCACGGCCATTCTTCTGCAGCCTTGCAGCTATTGAGTGGCTCTGCCTGCGCATGGAATTACTTTCGACCTTTGTATTTGCTTTCTGCCTGGTATTACTTGTTAGCCTTCCCCATGGAAGTATTGATCCCAGCATGGCTGGACTTGCGGTAACATATGGCCTGAATTTAAATGCACGTCTATCACGGTGGATACTTAGCTTTTGCAAACTTGAAAACAAAATTATATCCATCGAAAGAATTTATCAGTACAGCCAAATTACTAGTGAAGCACCTTCAATTATTGAAAATTCTCGTCCTCCATCCTCATGGCCAGAGAATGGGACAATTCAATTAAATGATCTTAAGGTACGTTACAAGGAAAATCTTCCTGTAGTGCTTCATGGAATATCCTGCACGTTTCCGGGTGGAAAGAAGATTGGAATAGTTGGTCGTACTGGCAGTGGCAAGTCTACTTTGATTCAAGCATTATTTCGATTAGTTGAACCAGAAGTTGGGAGTATCCTTATAGACAACATTAATATTTCATCAATTGGCCTTCATGACCTTAGAAGCCATTTGAGTATCATACCACAAGATCCAACCTTATTTGAAGGCACCATTCGAGGCAATCTCGATCCTCTTGAAGAGCACTCTGATAAAGAGATTTGGGAGGCACTAGATAAGTCTCAACTTGGAGAGATTATCCGTGAGACAGAGCGAAAGCTTGATATGCCAGTGCTGGAAAATGGAGATAATTGGAGCGTAGGACAGCGACAACTTGTTTCTTTGGGTCGAGCTTTGCTGAAGCAGTCAAAGATACTTGTTCTTGACGAAGCAACGGCATCTGTTGATACTGCTACTGATAATCTTATACAGAAGATTATTCGTAGAGAGTTTAGAGACTGCACTGTGTGCACTATTGCACATCGCATTCCCACTGTTATTGACAGTGATCTAGTGCTGGTACTCAGTGATGGTCGAGTTGCAGAATTTGACACTCCATCAAGGCTGTTAGAGGATAAGTCATCTATGTTTCTGAAATTGGTGACTGAGTATTCATCGCGATCAATATCAAGGGTGTACCACTCTAGGAGCATGGAGAATATTTTTTAA 4572 0.425 MGVARFFHDILGLPVLELATICVNLTFVLLFLFVVSVRRVLVYEGGFRFCKDGNTGNPSPICSVIDAEGRGVRIGVVFKLSVLCCFYVLFVHVLVLGFEGGALIWGEANGKADVDLSLLCVPAAQGLAWFVLSFSALYCKFKVSERFPFLLRVWWFLSFVICLCTLYVDGREFWVEGSKHLSSLAVANFAVTPALAFLCVVAIRGGTGIIVCGNNDLQEPLLVEEEPGCLTITPYRDAGLFSLATLSWLNPLLSIGAKRPLELKDIPLVAPRDRAKTSYKVLNSNWERLKVENDNPSKQPSLAWAILKSFWKEAALNAIFAGVNTLVSYVGPYMISYFVDYLGGRETFPHEGYILAGIFFVAKLVETVTTRQWYLGVDILGMHVRSALTAMVYKKGLRLSSSAKQSHTSGEIVNYMAVDVQRVGDYSWYLHDMWMLPLQIALALVILYKNVGIASLATLIATIISIVVTIPVARIQEDYQDKLMAAKDERMRKTSESLRNMRILKLQAWEDRYRMRLEEMRGVEFKWLRKALYSQAFITFIFWTSPIFVSAVTFATSILLGGQLTAGGVLSALATFRILQEPLRNFPDLVSTMAQTKVSLDRISGFLQDEELQEDATIVLPRGISNMAIEIKDGVFCWDSSLPRPTLSGIHVKVERGMIVAVCGMVGSGKSSFLSCILGEVPKLSGEVRVCGSVAYVSQSAWIQSGNIEENILFGTPMDKAKYKNVLHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFREYVLTALADKTVIFVTHQVEFLPAADMILVLREGHIIQAGKYDDLLQAGTDFNTLVSAHHEAIEAMDIPNHSEDSDENILLCLMTSKTSISSANDIEILAKELQEGSSDQKVIKEKKKVKRSRKKQLVQEEERVRGRVSMKVYLSYMAAAYKGLLIPLIIIAQTLFQFLQIASNWWMAWANPQTEGDQPKVTPTALLLVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFFNMLRSIFHAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASSTIQLIGIVAVMTDVTWQVLLLVVPMAIVCLWMQKYYMASSRELVRIVSIQKSPIIHLFGESIAGAATIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCLVLLVSLPHGSIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQITSEAPSIIENSRPPSSWPENGTIQLNDLKVRYKENLPVVLHGISCTFPGGKKIGIVGRTGSGKSTLIQALFRLVEPEVGSILIDNINISSIGLHDLRSHLSIIPQDPTLFEGTIRGNLDPLEEHSDKEIWEALDKSQLGEIIRETERKLDMPVLENGDNWSVGQRQLVSLGRALLKQSKILVLDEATASVDTATDNLIQKIIRREFRDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPSRLLEDKSSMFLKLVTEYSSRSISRVYHSRSMENIF 1523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1556g00007 1523 SUPERFAMILY ABC transporter transmembrane region 949 1244 IPR036640 GO:0005524|GO:0016020
Mupr1556g00007 1523 ProSitePatterns ABC transporters family signature. 754 768 IPR017871 GO:0005524|GO:0016887
Mupr1556g00007 1523 Pfam ABC transporter 647 781 IPR003439 GO:0005524
Mupr1556g00007 1523 FunFam ABC transporter C family member 5 913 1250 - -
Mupr1556g00007 1523 SMART AAA_5 656 837 IPR003593 GO:0016887
Mupr1556g00007 1523 SMART AAA_5 1295 1480 IPR003593 GO:0016887
Mupr1556g00007 1523 FunFam ABC transporter C family member 5 614 861 - -
Mupr1556g00007 1523 CDD ABC_6TM_ABCC_D1 316 603 IPR044746 GO:0140359
Mupr1556g00007 1523 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 952 1222 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr1556g00007 1523 CDD ABCC_MRP_domain1 629 828 - -
Mupr1556g00007 1523 FunFam ABC transporter C family member 3 1252 1504 - -
Mupr1556g00007 1523 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1260 1499 IPR027417 -
Mupr1556g00007 1523 SUPERFAMILY ABC transporter transmembrane region 304 611 IPR036640 GO:0005524|GO:0016020
Mupr1556g00007 1523 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 315 595 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr1556g00007 1523 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 625 851 IPR027417 -
Mupr1556g00007 1523 Gene3D ABC transporter type 1, transmembrane domain 911 1250 IPR036640 GO:0005524|GO:0016020
Mupr1556g00007 1523 Gene3D ABC transporter type 1, transmembrane domain 285 612 IPR036640 GO:0005524|GO:0016020
Mupr1556g00007 1523 CDD ABC_6TM_ABCC_D2 950 1244 IPR044726 GO:0140359
Mupr1556g00007 1523 Pfam ABC transporter 1286 1434 IPR003439 GO:0005524
Mupr1556g00007 1523 Gene3D - 623 857 IPR027417 -
Mupr1556g00007 1523 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 235 1506 - -
Mupr1556g00007 1523 Pfam ABC transporter transmembrane region 952 1196 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr1556g00007 1523 Pfam ABC transporter transmembrane region 318 583 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr1556g00007 1523 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 629 852 IPR003439 GO:0005524
Mupr1556g00007 1523 CDD ABCC_MRP_domain2 1267 1487 - -
Mupr1556g00007 1523 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1269 1503 IPR003439 GO:0005524
Mupr1556g00007 1523 FunFam ABC transporter C family member 10 298 611 - -
Mupr1556g00007 1523 Gene3D - 1252 1505 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1556g00007 Mupr-Chr1556 51836 60255 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1556g00007 629 845 Calmodulin-binding Proteins AT2G36910 30.043 1.63e-19 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1556g00007 - - gmx:100781010 2762.25