Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1556g00002 ATGGAGGAACCGCACAAACCAGACCAGACACGTGGGCCCACCCTGCCTTTCCCCTCTCTCTCTCCGACACACACTCTCTCTCTCTCTCTCTCTCTCTCAATTCCATCACCATTCCACCTAACCGTTTATTATACTCTTCCCTCAAAACTCAATTTCCTTCAAATTCATCCACCCCTTTGCCTTGTTCTTCCACAATTATCCCAAAAAACTGATTTTTTCCGTTCTGGTGGTTGTTCTAGTTTTGGGTCGATGTCAACGTTGTCCAAAGATGACAACTTGGTGCTGTCTTCGGAGGACTCTTCGTGCCCAGAAGAGTCTGAGCTTGAATTGGGTCTTGGGTTAAGCCTCTCTGGCCCTTCAAAGTCTCACCACCATGTCCATGCTCCTTCTTATGCTAGAATTTACACTGCTAAGGATTTTCCTTCTTCAGCACCCTCACCTTCCTCTTCTTCCTCTTCCTCTCCCAACATCACTGCTGGCACCAAGAGAGCTGCTGATTCTCTTGTTACCAATAACCGTCCCAGTCAAGTAGTTGGATGGCCTCCACTTCGAGCATATAGAGTGAATAGCTACAATAGCCATGCAAAATCAACTGAGGCATTCAACTCTGTACCTGAGAAGAGTAAGAGCAATAATACTGAGGTAAGGAAGAGTGCTGACAGTGGCAATGATAATAACATTAATGCCAAAGAAAAGAGACACCTCAGGAGTTCCCTGTTTGTCAAGGTAAATATGGATGGGATACCAATTGGAAGGAAGGTTGATTTGAGTGCTCATAGTTCCTATGAAACCTTAGCACAAACATTGGAGGATATGTTTAATGAATCGACTACAGTCATCACTTGCAAAGGATCAAATGGTGAGGATCATGGCATTATTATCGAAGGAGAAAGGCATTCAAAATTGTTGGATGGATCTTCCAAGTTTGTGCTCACATATGAAGACAAGGAAGGAGATTGGATGCTTGTTGGAGATGTTCCTTGGGGGATGTTCCTTAGTTCGGTGAGGAGGCTAAGAATCATGAGGACATCTGAGGCTAATGGACTTGCACCAAGATTGGAAGAAAACATGAGACAGAAAAGCAAGCCCATATAG 1095 0.4438 MEEPHKPDQTRGPTLPFPSLSPTHTLSLSLSLSIPSPFHLTVYYTLPSKLNFLQIHPPLCLVLPQLSQKTDFFRSGGCSSFGSMSTLSKDDNLVLSSEDSSCPEESELELGLGLSLSGPSKSHHHVHAPSYARIYTAKDFPSSAPSPSSSSSSSPNITAGTKRAADSLVTNNRPSQVVGWPPLRAYRVNSYNSHAKSTEAFNSVPEKSKSNNTEVRKSADSGNDNNINAKEKRHLRSSLFVKVNMDGIPIGRKVDLSAHSSYETLAQTLEDMFNESTTVITCKGSNGEDHGIIIEGERHSKLLDGSSKFVLTYEDKEGDWMLVGDVPWGMFLSSVRRLRIMRTSEANGLAPRLEENMRQKSKPI 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1556g00002 364 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 107 348 IPR003311 GO:0005634|GO:0006355
Mupr1556g00002 364 MobiDBLite consensus disorder prediction 197 225 - -
Mupr1556g00002 364 FunFam Auxin-responsive protein 233 353 - -
Mupr1556g00002 364 ProSiteProfiles PB1 domain profile. 238 345 IPR000270 GO:0005515
Mupr1556g00002 364 MobiDBLite consensus disorder prediction 197 231 - -
Mupr1556g00002 364 Gene3D - 233 355 - -
Mupr1556g00002 364 SUPERFAMILY CAD & PB1 domains 233 341 - -
Mupr1556g00002 364 Pfam AUX/IAA family 149 352 IPR033389 -
Mupr1556g00002 364 MobiDBLite consensus disorder prediction 142 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1556g00002 Mupr-Chr1556 7233 12116 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1556g00002 231 362 B3 DNA Binding Superfamily AT1G59750 33.582 7.67e-14 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mupr1556g00002 AUX_IAA 2e-62 CL0072