Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15569g00003 ATGTACACCTCTTCCTCCTCTTCCTCCTCGTCGTCTCAGTCCATGAGCCAAGGTCTCACGCGCTACGGCTCCGCACCGGGCTCTCTGCTCACGAGCACGGTGGACGCTCTCATAGGTGGATCGAGACCGTACTATTCCGGAGACTCTTCAGAGTCAACGTGCAAAGAGCAAAGATCTTATGACAATCACGCCTTCGGATCCGCCTTGCAACGGCAGAAAAGCTCCCCCGCCGGCTTCCTCTCGCATCTGGCGGCCACCACTAACACCAACCAGAATGCAGGGTTCACTATCACTCGGGGTTCTTCATCTAGGTTGAAGTCTCAATTGAGCTTCACTGGTCACTGCCAAGACTCTCTTTCTGGCGCCGAAAATACTAGTAATAATAATGCCTTCGCCATGGACGCCTGGGACAATTCCATCGCCTTTTCTGCTCCGCCAACCAAGCGCTCCAAAAATAACAACGATACCGACATTCTACATTGCCTCAATGCCTTGGAATCTCAGTTTAGTCTGCCACAAACAAGTCTTGAAATGTCCACGGTCGAGAAGCTATTGCACATTCCCGAAGATTCTGTGCCTTGTAAAATCCGTGCTAAGCGAGGTTGTGCTACTCATCCGCGTAGCATTGCAGAGCGGGAGAGAAGAACAAGAATAAGCGGGAAGCTCAAGAAATTACAGGACCTTGTACCTAATATGGATAAGCAAACAAGCTATGCAGACATGCTCGATTTGGCCGTTCAACATATTAAAGGTCTTCAAACTCAGGTTCAGAACCGGACCAAATAG 786 0.5 MYTSSSSSSSSSQSMSQGLTRYGSAPGSLLTSTVDALIGGSRPYYSGDSSESTCKEQRSYDNHAFGSALQRQKSSPAGFLSHLAATTNTNQNAGFTITRGSSSRLKSQLSFTGHCQDSLSGAENTSNNNAFAMDAWDNSIAFSAPPTKRSKNNNDTDILHCLNALESQFSLPQTSLEMSTVEKLLHIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIKGLQTQVQNRTK 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15569g00003 261 Gene3D - 199 261 IPR036638 GO:0046983
Mupr15569g00003 261 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 25 257 - -
Mupr15569g00003 261 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 205 258 IPR036638 GO:0046983
Mupr15569g00003 261 Pfam Helix-loop-helix DNA-binding domain 207 253 IPR011598 GO:0046983
Mupr15569g00003 261 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 202 252 IPR011598 GO:0046983
Mupr15569g00003 261 CDD bHLH_AtbHLH_like 207 257 IPR045239 -
Mupr15569g00003 261 SMART finulus 208 258 IPR011598 GO:0046983
Mupr15569g00003 261 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15569g00003 Mupr-Chr15569 31725 36026 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15569g00003 69 261 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05805 54.299 6.45e-61 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr15569g00003 HLH 3.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15569g00003 - - vra:106771988 388.267