Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15558g00001 ATGTTTGACTCCACTCCCTCAGGGATGACAAGAAGCTCCTCCCATGTGGCCTCCATTTATGACAATGATTTCCTCGAGCTGGTATGGGAAAATGGTGAAGTTGTTGTGCGAGGAGGTTCATCAAATAGGACAGAAAAGACTGGAATAAGCCCTTCACGTAATAGCGAGGAAAGAATACACTTATTAAAGACTGGAAAGCCCTTTGAAGATGGCAGCATTACAAAAACAACAAGGTTGAACACATTATACTCACTTGAAGATGATCACTTTCCCCCTCAAAGGGACTCTGACATGAACTCTTCACATCAAAGCACTGGCCAAGATTCGTGTCAATCCTCCCAAACCAAGAATTCCTCCAAGCTTCTTAATGAAGAATTTGCAAACTTATTAAGACCAGTCACAGGCCTAGGCAATAGTCACTTACAACAGTGCTTACCCTCAGCTTCATTCAAGAAACAAACAACAGATTCAACCCAAACACCGGCATCAGCAACAAACACACGAAACTTGGGATGTAATCAAAGAACTCAAAAAGCGAACTTCTCCAACTTTTCCATACCCGCAGTGTTTCTAAAATCTACAACTTGTCAAGGAAACAGTGCAACTCAGCAGGCAAAAAATAATGCATCTCAAGGAAGAGTGGAGGAGGTTGAAGCGCGCAAGGTTGAGAAATCAGCTAAAGAATCGCATGGATTTCAAAAACAAACATCGTTAACTGTTGAAAGAAGCGCAAAACCACCCCCACCTCCACCCCTTGATGAACAATCTGAAGCTGTTGGTCATAACAGTGGTGGTGCCCTTGAAATTCACAGATCCCAAGGTCAACGTTGCGACCAAACCTCAAGCGCAGCCAAGGCTAAAGCCAATACTAACATGTGTCATGAGCCCTTTCTAGCATCTTCTTCTGTGTGCTCTCTTGGAGCCTCCAACGACCCAAACCCTGGAATAAGGAAACATGACGACACTGATGACTCAACATATTTAAGCGATAATGATGGAGAGCCAGAAGATATAGAAAAACAAACGCCGGAAAGGGAGGGTGGCAGAGTCAAGAGAGGCAGGAATGCAGTGGTTCATAACTTATCTGAAAAGAAGCGAAGAGAAAAAATCAACAAGAAGATGCGTACATTGAAGGAGCTGATACCCAATTGCAACAAGGTGGACAAAGCATCAATGCTTGACGATGCCATCGACTATCTGAAGACTCTAAAGCTTCAGTTACAGATGATGTCAATGGGAAGTGGGTTATGGCCACTTATGATGTTACCAGCGGCGCATCATATGAATGGACCACAGTTAGTTGGAGGTGGAATGGGATTCAGGCCAGCACAGCTTCCAATTCCAGCACTTTCTGGTATGACAGACAACAGACTTCAGATGTTTGGTTTCCCCAACCAAATACCAACTATGCCAATGCCTCAAGCACCTTTCTTTCCCATGATTGGAAATTCTGGCACACAACCACACTTGGCTAACACCACCAACCTGCCACAACATTTAGCTAATTCTGCAACACTAAAGGTCCCTGCAGTCCCCAACAACTCATCAGTTTTTCATGAGAATGTAACAAAGCAAGGGCCTAATCACGTTTCCTTTCACCACCTCGGCACTAGTTCACTAGCTACTACCCCTTTCATTTTTCCACAAACATAG 1653 0.4404 MFDSTPSGMTRSSSHVASIYDNDFLELVWENGEVVVRGGSSNRTEKTGISPSRNSEERIHLLKTGKPFEDGSITKTTRLNTLYSLEDDHFPPQRDSDMNSSHQSTGQDSCQSSQTKNSSKLLNEEFANLLRPVTGLGNSHLQQCLPSASFKKQTTDSTQTPASATNTRNLGCNQRTQKANFSNFSIPAVFLKSTTCQGNSATQQAKNNASQGRVEEVEARKVEKSAKESHGFQKQTSLTVERSAKPPPPPPLDEQSEAVGHNSGGALEIHRSQGQRCDQTSSAAKAKANTNMCHEPFLASSSVCSLGASNDPNPGIRKHDDTDDSTYLSDNDGEPEDIEKQTPEREGGRVKRGRNAVVHNLSEKKRREKINKKMRTLKELIPNCNKVDKASMLDDAIDYLKTLKLQLQMMSMGSGLWPLMMLPAAHHMNGPQLVGGGMGFRPAQLPIPALSGMTDNRLQMFGFPNQIPTMPMPQAPFFPMIGNSGTQPHLANTTNLPQHLANSATLKVPAVPNNSSVFHENVTKQGPNHVSFHHLGTSSLATTPFIFPQT 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15558g00001 550 MobiDBLite consensus disorder prediction 311 352 - -
Mupr15558g00001 550 CDD bHLH_AtPIF_like 354 416 IPR047265 -
Mupr15558g00001 550 Pfam Helix-loop-helix DNA-binding domain 358 403 IPR011598 GO:0046983
Mupr15558g00001 550 Gene3D - 350 412 IPR036638 GO:0046983
Mupr15558g00001 550 MobiDBLite consensus disorder prediction 333 352 - -
Mupr15558g00001 550 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 354 403 IPR011598 GO:0046983
Mupr15558g00001 550 MobiDBLite consensus disorder prediction 150 170 - -
Mupr15558g00001 550 MobiDBLite consensus disorder prediction 201 260 - -
Mupr15558g00001 550 PANTHER TRANSCRIPTION FACTOR PIF3 3 529 IPR044273 GO:0003700|GO:0006355
Mupr15558g00001 550 MobiDBLite consensus disorder prediction 213 230 - -
Mupr15558g00001 550 MobiDBLite consensus disorder prediction 96 118 - -
Mupr15558g00001 550 SMART finulus 360 409 IPR011598 GO:0046983
Mupr15558g00001 550 MobiDBLite consensus disorder prediction 86 118 - -
Mupr15558g00001 550 FunFam Basic helix-loop-helix transcription factor 349 412 - -
Mupr15558g00001 550 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 353 418 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15558g00001 Mupr-Chr15558 6950 9245 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15558g00001 295 534 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G46970 37.066 1.96e-33 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr15558g00001 HLH 3.8e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15558g00001 K12126 - gmx:100804665 667.922