Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15554g00003 ATGAAGAAGCTCCGAATCGTAAAGGTTCTGCAGCTGCGGCACTGTTTCTCCGAGCTTGTGACTATAGTGAGGGTTAGTGTCTTGGATGATGCTCTCAAGAGCATGTACAATGCTGAGAAACGGGGGAAGCGCCAGGTCATGATTAGGCCATCCTCGAAAGTGATTATAAAATACCTTTTGGTGATGCAGAAGCATGGATACATAGGGGAGTTCGAATATGTTGATGATCACAGGGCTGGCAAAATTGTGGTTGGACTGCAAGGCTACTTCCCTCAAGACAGATGTGGAATTGAACTTGCTGAAGTTGCTATCATAGAACAAACCATTAAACTTTTATGTTGTCCGTTACTCTGCTGTATTTTGACCACCTCTGCTGGTATCATGGATCATGAAGAGGCTAGAAGAAAGAATGTCGGTGGTAAAGTGTTGGGTTTCTTCTACTAG 444 0.4414 MKKLRIVKVLQLRHCFSELVTIVRVSVLDDALKSMYNAEKRGKRQVMIRPSSKVIIKYLLVMQKHGYIGEFEYVDDHRAGKIVVGLQGYFPQDRCGIELAEVAIIEQTIKLLCCPLLCCILTTSAGIMDHEEARRKNVGGKVLGFFY 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15554g00003 147 PANTHER 40S RIBOSOMAL PROTEIN S15A 23 146 IPR000630 GO:0003735|GO:0005840|GO:0006412
Mupr15554g00003 147 Pfam Ribosomal protein S8 28 147 IPR000630 GO:0003735|GO:0005840|GO:0006412
Mupr15554g00003 147 SUPERFAMILY Ribosomal protein S8 25 147 IPR035987 GO:0003735|GO:0005840|GO:0006412
Mupr15554g00003 147 Gene3D - 22 90 - -
Mupr15554g00003 147 Gene3D - 94 147 - -
Mupr15554g00003 147 FunFam 40S ribosomal protein S15a 22 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15554g00003 Mupr-Chr15554 14144 15789 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15554g00003 22 147 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 68.939 2.06e-58 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15554g00003 K02957 - han:110936430 173.326