Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15546g00002 ATGAAGAAATGTCCCAACGGCCCAACAGGACGCATGCGAACAGGGACACCTCACCCACCCCACCCTGTTCTGTTTGTTCGGTTCCACCCAACTACACTCTCTAATGCTCTCAGGCGAGGGAGGGAGAATCTGCAATTTCCAATTGAATTGAACATTCATCAAATGGCATCATCATCCATGATCTCAAACCCGGTACCCAACATGGACCGGTCACGTGACTCCAAGAGACGGAAGAAGAAGAAAGCGCAGCTGAAGCCACAGCACCCAAAGTGGAAATCCCAAGCGCAACAACAAATCTACTCCTCCAAGCTGCGCCAAGCCTTAGCCACACTTAACCTCAGCTCCGCGCCGCGCCAAGGCAAAGCCGTACGCGAAGCAGCCGACAGAGTCTTAGCCGCGGCTGCCAAGGGGAGGACGCGCTGGAGCCGAGCCATCCTCACGAACCGGCTCAAGCTCAAGTTCACCAAACACAAGAGGCAGAGGGTGACAGCGCCGCTAACGCGCTCAAAAAAACCCCGAATCAGTGTTTACCGGCTGAAGGGGAAGAGTTCACCGGGTGTGCAGAGAAAAGTGAAGTTCCTGGGACGATTGGTTCCCGGTTGCCGTAAGGAACCGTTACCGGTTATTTTGGAAGAAGCCATTGATTACATACCCGCGCTCGAGATGCAGGTTCGAGCCATGACCGCTCTCGTTAACCTCCTCTCCGCTTCTTCCGCCGCCGCGCCCACTACCGCTTAA 738 0.5515 MKKCPNGPTGRMRTGTPHPPHPVLFVRFHPTTLSNALRRGRENLQFPIELNIHQMASSSMISNPVPNMDRSRDSKRRKKKKAQLKPQHPKWKSQAQQQIYSSKLRQALATLNLSSAPRQGKAVREAADRVLAAAAKGRTRWSRAILTNRLKLKFTKHKRQRVTAPLTRSKKPRISVYRLKGKSSPGVQRKVKFLGRLVPGCRKEPLPVILEEAIDYIPALEMQVRAMTALVNLLSASSAAAPTTA 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15546g00002 245 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 191 238 IPR036638 GO:0046983
Mupr15546g00002 245 CDD bHLH_AtIBH1_like 178 231 IPR044549 GO:0006355
Mupr15546g00002 245 MobiDBLite consensus disorder prediction 57 94 - -
Mupr15546g00002 245 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 93 234 IPR044660 GO:0006355
Mupr15546g00002 245 MobiDBLite consensus disorder prediction 1 22 - -
Mupr15546g00002 245 MobiDBLite consensus disorder prediction 73 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15546g00002 Mupr-Chr15546 18486 19290 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15546g00002 90 232 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 57.500 3.26e-52 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15546g00002 - - gmx:100803765 250.751