Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15523g00001 ATGGAGCCTTTTGAGAATGAGTGTTGTAAGAGGGCTAAATTCAAGAGCACAGAAAGAGAAAGGAGAAAAGAGAGGGAAAAGGGAAACATTGACGATAATATGCCAACAGTGTGGTTCTCTCTGAAGAAGTCTTTACACTGCAAATCTGAGCCATCTGATGTTCATGACCCCAAAACAAGGAAGCACTTGAGCACAATCTTGACCAAGAGAGCAGGGAGGTCAGGGTGTTCCAGGTCCATAGCAAATCTCAAAGATGTAATCCATGGAAGCAAGAGGCATCTTGATAAGCCACCAAGTTGCAGTCCAAGATCCATTGGGAGCAGTGAGTTCCTCAACCCCATAACTCATGAGGTCATATTGAGCAACTCAAGGTGTGAGCTGAAGATAACTGGCTATGGAGGGTTCCAAGAAGGGGTTGGCAGTGGTGGCAGCAATGGTGGTGGTGGTGGCGGCGGCGGTTCAACTTTTGTTGGGACTTTGAGGCCTGGAACTCCTGGCCCTGGAGGGCACCCCACAATGCACTACTTCAACCCTTCTTTTAGGACTTCATCCACTCCTCCAAGGAAGTCTCCTTTTCTTCTATCAGATAAAGAAGGGTCTGGTCCTCATCCTAGCAATAGGTTGTCTCTTGAGACAGATTCCAATGGCTCTTCAACTGTGACTTGCCACAAATGTGGAGAGCAATTTAACAAATGGGATGCTGCTGAAGCTCATCATCTGTCCAAGCATGCTGTGACTGAACTTGTGGAAGGAGACTCATCAAGGAAAATAGTGGAGATAATATGCAGGACTAGCTGGTTGAAGTCTGAAAACCAGTGTGGTAGAATTGAGAGAGTCTTAAAGGTTCACAACATGCAAAAGACTCTTGCAAGATTTGAAGAGTACAGGGAGATGGTGAAGATCAAAGCCAGCAAACTCCAGAAGAAGCATCCAAGATGCCTGGCTGATGGGAATGAGCTCTTGAGGTTCTATGGCACCACTGTGGCATGCTCTCTTGGCCTCAATGGCTCTTCCAGCCTCTGCCTATCAGAAAAGTGCTGTGTTTGCAGAATCATAAGGAATGGTTTCTCAGCCAAGAAGGAGCTCAAGGGTGGCATTGGAGTTTTCACAACATCCACAAGTGGAAGGGCTTTTGAGTCCATTGAGATTTTTGGTGATGAGCCATCACTGAGAAAGGCACTGATAGTGTGCAGAGTGATTGCTGGCAGGGTTCATAGGCCACTTGAGAACATTCAGGAAATGGTAGCACAAACAGGATTTGACTCATTGGCTGGGAAAGTGGGTCTGTATTCAAACATTGAGGAGCTTTATTTGCTCAATCCTAGAGCTCTTCTTCCTTGCTTTGTG 1347 0.464 MEPFENECCKRAKFKSTERERRKEREKGNIDDNMPTVWFSLKKSLHCKSEPSDVHDPKTRKHLSTILTKRAGRSGCSRSIANLKDVIHGSKRHLDKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGYGGFQEGVGSGGSNGGGGGGGGSTFVGTLRPGTPGPGGHPTMHYFNPSFRTSSTPPRKSPFLLSDKEGSGPHPSNRLSLETDSNGSSTVTCHKCGEQFNKWDAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENQCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLQKKHPRCLADGNELLRFYGTTVACSLGLNGSSSLCLSEKCCVCRIIRNGFSAKKELKGGIGVFTTSTSGRAFESIEIFGDEPSLRKALIVCRVIAGRVHRPLENIQEMVAQTGFDSLAGKVGLYSNIEELYLLNPRALLPCFV 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15523g00001 449 SUPERFAMILY ADP-ribosylation 245 448 - -
Mupr15523g00001 449 MobiDBLite consensus disorder prediction 176 190 - -
Mupr15523g00001 449 Gene3D - 234 449 - -
Mupr15523g00001 449 MobiDBLite consensus disorder prediction 143 215 - -
Mupr15523g00001 449 ProSitePatterns Zinc finger C2H2 type domain signature. 222 243 IPR013087 -
Mupr15523g00001 449 FunFam C2H2-like zinc finger protein 244 449 - -
Mupr15523g00001 449 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 37 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15523g00001 Mupr-Chr15523 3194 5139 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15523g00001 34 449 C2H2 Transcription Factor Family AT5G54630 68.777 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr15523g00001 None None None