Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15502g00001 CTGACAATTCTGCGTAAAGAGGCGGCGCGGTTCGCCAATTTGTCCAACCTTGGTATAGAATTGAATAATTTACTTGAAGCCTTTGAAATTGTGTTATTTGACTCACGTTATTTCTTAACCTACAAACATTTAACGAAGACTAGAATGGATTTTAATTCTTCTCAATTTTGGTACCAAAGTCTAGAATCTTCCGATCTCAATTCATGGGAAGAGTTGTTTTCGTTCAACAAGCTTCCCTTGAATAATGTAAGGAAGGAATCGACGTGGGACTCGAAAACTTCATCGGAGAATATGTGTGAAGGTTCAAATCCAAAAGCGGTATCAACAAAAGCATCAACATGTAAGCGAGAGAAGAGGGGATACAGAGGAGTAAGAAGAAGGCCATGGGGAAAGTTCGCAGCAGAGATAAGGGACCCCACAAGAAATGGGGTTCGAGTATGGATTGGAACATTCGACACTGCTGAGGAAGCTGCTTTGGCTTATGACCAAGCAGCTTTCTTGACGAAGGGCGTTCTTGCTACCCTTAACTTTTCAGTGCAAGTGGTCATGGATTCCCTCCAACAAATGGGTTTCAAAACATTGAGGAATCATCGCTCACCCTTGTTGGAACTCAAAAGGATGCACCTTTTCACAACTAAATCTAAGGCTACCAAAAAAAGGCCTTCCAACAACCCCAACTTGGACACTGCTCACAATGTGTTGGTGTTGGAGGATTTGGGACCTGAATATCTAGACCAACTTTTGACCTTCACTTGCCCCGCTTCTTCCACAATAATATACTTAGCCTATCTCTTCAAAGCAACCATTAATATGACTTCTCCTTTCTCTCAGCATTCAGATTGGGGCACGTTGAAGGAGCCTTCGAATATTTTGTTCGAATCATTTTCAAGCAGAGGTATTGATTATGACCCTATCCATGACTCTCTAGCATATAATATGAATCCACAGGAAGCAAGTCATCAAGTGATTAAAACTAACAAGTCTTATATTGGGATAAGGAGAAGGCCATGGGGGAAATTTGCAGCGGAGATCAGAGACACAACGAGGAAAGGTAGAAGGGTTTGGCTTGGAACGTTTGATAGTGCAGAAGAAGCTGCTTTGGCTTATGACCAGGCTGCATTTTCCATGAGAGGCTTAAGTGCAGTGCTGAATTTTCCTGTCAAAAGGGTCAAAGAGTCTTTACAAGAGATGAATTATTCTGGTTGCAGCCAAGGGTGCTCTCCTGCATTAGAACTCAAAGAGAGGCACAACATCCGACGAAAATTGTCATCAAAGGCTAAGAAAAGTAACGGGAAACAGGAATTGGAGGGATCGAGTGTTGTGGTACTAGAGGACTTGGGAGCTGAATATCTGGAGGCACTTCTTAGCATATCGGATCCAAGTGCAAGTTCTGCTGCTTTAAATAACCAGAAATTCTATGATATCTTTGAAAAT 1434 0.4212 LTILRKEAARFANLSNLGIELNNLLEAFEIVLFDSRYFLTYKHLTKTRMDFNSSQFWYQSLESSDLNSWEELFSFNKLPLNNVRKESTWDSKTSSENMCEGSNPKAVSTKASTCKREKRGYRGVRRRPWGKFAAEIRDPTRNGVRVWIGTFDTAEEAALAYDQAAFLTKGVLATLNFSVQVVMDSLQQMGFKTLRNHRSPLLELKRMHLFTTKSKATKKRPSNNPNLDTAHNVLVLEDLGPEYLDQLLTFTCPASSTIIYLAYLFKATINMTSPFSQHSDWGTLKEPSNILFESFSSRGIDYDPIHDSLAYNMNPQEASHQVIKTNKSYIGIRRRPWGKFAAEIRDTTRKGRRVWLGTFDSAEEAALAYDQAAFSMRGLSAVLNFPVKRVKESLQEMNYSGCSQGCSPALELKERHNIRRKLSSKAKKSNGKQELEGSSVVVLEDLGAEYLEALLSISDPSASSAALNNQKFYDIFEN 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15502g00001 478 MobiDBLite consensus disorder prediction 92 110 - -
Mupr15502g00001 478 PANTHER DNA-BINDING DOMAIN 315 459 IPR044808 GO:0003700|GO:0009873
Mupr15502g00001 478 SMART rav1_2 120 184 IPR001471 GO:0003700|GO:0006355
Mupr15502g00001 478 SMART rav1_2 328 392 IPR001471 GO:0003700|GO:0006355
Mupr15502g00001 478 ProSiteProfiles AP2/ERF domain profile. 328 386 IPR001471 GO:0003700|GO:0006355
Mupr15502g00001 478 FunFam Ethylene-responsive transcription factor 2 327 388 - -
Mupr15502g00001 478 MobiDBLite consensus disorder prediction 92 112 - -
Mupr15502g00001 478 CDD AP2 327 387 IPR001471 GO:0003700|GO:0006355
Mupr15502g00001 478 PRINTS Ethylene responsive element binding protein signature 121 132 IPR001471 GO:0003700|GO:0006355
Mupr15502g00001 478 PRINTS Ethylene responsive element binding protein signature 144 160 IPR001471 GO:0003700|GO:0006355
Mupr15502g00001 478 ProSiteProfiles AP2/ERF domain profile. 120 178 IPR001471 GO:0003700|GO:0006355
Mupr15502g00001 478 SUPERFAMILY DNA-binding domain 120 179 IPR016177 GO:0003677
Mupr15502g00001 478 CDD AP2 121 177 IPR001471 GO:0003700|GO:0006355
Mupr15502g00001 478 SUPERFAMILY DNA-binding domain 328 387 IPR016177 GO:0003677
Mupr15502g00001 478 FunFam Ethylene-responsive transcription factor 2 119 179 - -
Mupr15502g00001 478 Pfam AP2 domain 120 166 IPR001471 GO:0003700|GO:0006355
Mupr15502g00001 478 Pfam AP2 domain 328 378 IPR001471 GO:0003700|GO:0006355
Mupr15502g00001 478 Gene3D AP2/ERF domain 327 388 IPR036955 GO:0003700|GO:0006355
Mupr15502g00001 478 Gene3D AP2/ERF domain 120 181 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15502g00001 Mupr-Chr15502 791 6081 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15502g00001 324 463 AP2-EREBP Transcription Factor Family AT3G23240 59.155 1.38e-50 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mupr15502g00001 AP2 3.6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15502g00001 K14516 - gmx:100800600 293.123