Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1549g00005 ATTCTAATCTCAACGAACAATCCTATCGATTCCTCTTTTCAACATTCTCTTTCATCGTTTTCTGAATCCATCGCTATATTGCACTACACGACAAGTATCCACAGTGAAGTAAAAATGTTGTTGATGTGTGACTTTGCAGTTATGAGGAGCCAACTTGTGTGTAATGGGTGTAGGAACATTTTGGTTTACCCTAGAGGAGCAACCAATGTTTGCTGTGCATTGTGCAACACCATTACCTCTGTTCCTCCTCCTGGAATGGAAATGTCACAACTTTATTGCGGAGGCTGTAGGACATTGCTAATGTACACACGTGGTGCTACAAGTGTGAGATGTTCGTGCTGTCAGACTATTAACCTTGTACCAGAATCTAATCAAGTCAGCCATGTCCATTGTGCAAACTGCCGGACAATACTCATGTATCCTTACGGAGCTCCCTCAGTCAAATGTGCAATTTGTCACTATATTACTAATGTCAGTATGACCAATGGAAGGCTTCCAATTCCTGTACAGAGACCAAATGGAACAGCCAACTCTGGAACATCAATGCCTCATTCTCAGAGACAAACTGTCGTAGTTGAAAATCCTATGTCTGTTGATTCGAGTGGGAAATTGGTGAGCAATGTTGTTGTGGGCGTTACAACAGATAAGAAATGA 654 0.4174 ILISTNNPIDSSFQHSLSSFSESIAILHYTTSIHSEVKMLLMCDFAVMRSQLVCNGCRNILVYPRGATNVCCALCNTITSVPPPGMEMSQLYCGGCRTLLMYTRGATSVRCSCCQTINLVPESNQVSHVHCANCRTILMYPYGAPSVKCAICHYITNVSMTNGRLPIPVQRPNGTANSGTSMPHSQRQTVVVENPMSVDSSGKLVSNVVVGVTTDKK 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1549g00005 217 Pfam LSD1 zinc finger 54 78 IPR005735 -
Mupr1549g00005 217 Pfam LSD1 zinc finger 131 155 IPR005735 -
Mupr1549g00005 217 Pfam LSD1 zinc finger 93 117 IPR005735 -
Mupr1549g00005 217 PANTHER PROTEIN LSD1 50 216 IPR040319 -
Mupr1549g00005 217 NCBIfam zinc finger domain, LSD1 subclass 51 81 IPR005735 -
Mupr1549g00005 217 NCBIfam zinc finger domain, LSD1 subclass 128 157 IPR005735 -
Mupr1549g00005 217 NCBIfam zinc finger domain, LSD1 subclass 90 120 IPR005735 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1549g00005 Mupr-Chr1549 27194 34421 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Mupr1549g00005 zf-LSD1 9.7e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1549g00005 - K12191 gmx:100776644 316.235