Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15481g00001 ATGGCGGGTGGGAGTGTCTTTTGCTCTGCTTCCAATTTAACTACTTTGCTTCCCAACCAAACCTCTCAGCCTCCTGATTCTCTTTTCCTTTCTGCCTCTTCCCCTTTCCTCGGTTCGAGATCTATAGTGAGTTTTGGAGATGTTCAAGGAGGGAAGGGGTGCAACGACTCGTTCTTCCGCCCTTACGATGAGAATGGGGATGAGGACATGGACGAGTACTTTCACCAGCCTGGGAAGAAGCGCAGGCTCTCGGTGGAGCAAGTGCAGTTTCTTGAGAAGAGCTTTGACGACGAGAACAAGCTCGAACCCGAGAGGAAAATTCGCCTAGCCAAGGAACTCGGTTTGCAGCCACGCCAGGTGGCCATTTGGTTTCAGAACCGCCGCGCCCGGTGGAAGTCCAAGCGGTTGGAGAAGGATTATGATTCCCTCCAGGCTAGCTATAATGATCTCAAGGCCAACTATGATAACCTTCTCAGGGAAAAGGATAAACTCAAAGCTGAGGTGGCAAGGCTCGCTGAGAAGGTGCTTGGAAGAGAGAAACATGAGGAAAATGTTAAACAGGATGAAACCAGGGAATTGCAGGAGCCACTGCAGAAGTGTTTGATTGATTCAGCTTCGGAGGGTGAAGGGTCCAAAGTGTCCATCGGGGCATGTAAAGTGGAAGACATTAGTTCAGCCAAGAGTGACATATTTGATTCAGAAAGCCCACATTACACGGATGGAGTACACTCTGCACTCCTTGAGACTGGTGATTCTTCTTACGTGTTTGAACCTGATCAGTCTGATGTGTCTCAGGATGAAGAAGATAACTTGAGCAAGACCCTTTTCCCTCCTTACATCTTTCCCAAACTTGAAGATGTTGATTACTCCGACCCGCCTCATAGTTCATGTCATTTTGGAATTCCGGAGGAAGATCAAGCCATTTGGTCCTGGTCCTACTGA 942 0.4862 MAGGSVFCSASNLTTLLPNQTSQPPDSLFLSASSPFLGSRSIVSFGDVQGGKGCNDSFFRPYDENGDEDMDEYFHQPGKKRRLSVEQVQFLEKSFDDENKLEPERKIRLAKELGLQPRQVAIWFQNRRARWKSKRLEKDYDSLQASYNDLKANYDNLLREKDKLKAEVARLAEKVLGREKHEENVKQDETRELQEPLQKCLIDSASEGEGSKVSIGACKVEDISSAKSDIFDSESPHYTDGVHSALLETGDSSYVFEPDQSDVSQDEEDNLSKTLFPPYIFPKLEDVDYSDPPHSSCHFGIPEEDQAIWSWSY 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15481g00001 313 PRINTS Lambda-repressor HTH signature 105 114 IPR000047 GO:0003677
Mupr15481g00001 313 PRINTS Lambda-repressor HTH signature 114 130 IPR000047 GO:0003677
Mupr15481g00001 313 Pfam Homeobox associated leucine zipper 134 175 IPR003106 GO:0006355|GO:0043565
Mupr15481g00001 313 Pfam Homeodomain 79 132 IPR001356 GO:0003677
Mupr15481g00001 313 SMART HOX_1 76 138 IPR001356 GO:0003677
Mupr15481g00001 313 FunFam homeobox-leucine zipper protein ATHB-6-like 82 128 - -
Mupr15481g00001 313 Coils Coil 133 174 - -
Mupr15481g00001 313 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 66 225 IPR045224 GO:0003700
Mupr15481g00001 313 ProSitePatterns 'Homeobox' domain signature. 109 132 IPR017970 GO:0000981|GO:0006355
Mupr15481g00001 313 SUPERFAMILY Homeodomain-like 66 134 IPR009057 -
Mupr15481g00001 313 CDD homeodomain 77 135 IPR001356 GO:0003677
Mupr15481g00001 313 Gene3D - 73 141 - -
Mupr15481g00001 313 ProSiteProfiles 'Homeobox' domain profile. 74 134 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15481g00001 Mupr-Chr15481 5447 7310 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15481g00001 77 311 Homeobox Transcription Factor Family AT3G01470 39.916 2.22e-44 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mupr15481g00001 Homeodomain 8.6e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15481g00001 - - gmx:732618 541.191