Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1547g00001 ATGGAGAGCAGTGACACTTCATCTGCCCCACTTTCTCATCACTCTGTCTCTGTCTCTCCCACTTCCTCTTCTTCCTCACCACCACCACCAGCTCCCACAATCGTGATGAGCCCTTGTGCTGCTTGCAAGATTTTGAGGAGAAGATGTGCTGAAAAATGTGTATTGGCACCTTATTTTCCTCCCACTGAACCAACCAAGTTTACCATTGCCCACCGTGTATTTGGTGCCAGCAACATCATCAAGTTCCTACAGGAACTTCCAGAGTCTCAGAGAGCTGATGCAGTGACCAGCATGGTTTATGAAGCTAGTGCAAGAATAAGAGACCCTGTTTATGGTTGTGCAGGAGCAATTTGCCAGCTCCAAAAGCAGGTCAATGAACTTCAAGCACAATTGGCCAAGGCACAAGCTGAGATTGTAAACATGCAACTTCAGCAAGCCAATCTTGTGGCTCTAATTTGCATGGAAATGGCACAGACTCCACAGGAATCACCCCAGCAATCAGTGGATAATTTCATTTCAAGTCCTCCCTACAGTGGTGGCTATCAAAGTGGCATGAACTTCTTTGAGGAGAACACTAGCCTAAACTCACTATGGGAGCCTCTTTGGACTTGA 612 0.4673 MESSDTSSAPLSHHSVSVSPTSSSSSPPPPAPTIVMSPCAACKILRRRCAEKCVLAPYFPPTEPTKFTIAHRVFGASNIIKFLQELPESQRADAVTSMVYEASARIRDPVYGCAGAICQLQKQVNELQAQLAKAQAEIVNMQLQQANLVALICMEMAQTPQESPQQSVDNFISSPPYSGGYQSGMNFFEENTSLNSLWEPLWT 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1547g00001 203 MobiDBLite consensus disorder prediction 1 31 - -
Mupr1547g00001 203 Pfam Lateral organ boundaries (LOB) domain 38 135 IPR004883 -
Mupr1547g00001 203 MobiDBLite consensus disorder prediction 1 22 - -
Mupr1547g00001 203 ProSiteProfiles LOB domain profile. 37 138 IPR004883 -
Mupr1547g00001 203 Coils Coil 117 144 - -
Mupr1547g00001 203 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 37 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1547g00001 Mupr-Chr1547 9336 11121 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1547g00001 34 203 AS2 family AT1G07900 65.318 4.72e-78 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mupr1547g00001 LOB 2.1e-41 No_clan