Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15476g00001 ATGGAATTACAATTAAAAGTATCATTTCTTGAGAGGCCGATCGGGGTGGAAGGAGAGTCTAATTATGACGAGGTTGCAGAGCTGATATGGGAAAATGGCCATCTATCCATGCATGGGCTTGGTGGGCTTCAACCTACTACTACTCAGGAAAAGCCCATATTGAGTAGGGCCCACGACACGCTAGAGTCTATGGTTCAACATGCCACGTACCAACATTATCAACCGTCAAAATTCACTAGAGAAGTTAATGCCCCTAGTCGTATAAACTCCGTTGCTGCACCCTACGGTGAGATTCAAGCGGTGCCATCATCGACGAGGAAGCGAACATGGTCGAACTCCGATTACTCTGGGAGAAATTTAGGCACCAACACTAACGTGTTAGAAGAATGTGACATCCTCAGTGGTTGTGCTAGTGCTGGTGCCACGTTTTGTAGGGACAATGATACAACCATGATGACATGGGCCTCTCTAGAATCTGGTCGAAGCCTGAAAACCATGGAGGAAGATTCAGCTTGTCACTGTGGATCGGAAATTCGAGATAACCAAGATGACAGAGACAGCAAAGCAGAAATAGGCCAAGGCAACTCAAAAAGACGAAGTCGAACTGCTGCGGTCCATAACCAGTCTGAGCGAAAAAGAAGAGATAGAATTAATCAAAAGATGAAAGCCTTGCAGAAGTTGGTGCCTAATGCAAGTAAGACGGATAAAGCTTCAATGTTAGATGAGGTAATTAACTACTTAAAGCAGCTTCAAGCACAGATCCAAATGATGAACATGACAAGCATGCCCCAAATGATGGTCCCTTTGGCCATGCAACAACAGCTTCAGATGTCAATGCTAGCCAGGATGGGTGCTGCTGGGCTTGGCATGGGAATGGGAATGGTGAACATAAATAACATGGCAGCCCAAACAAGTGGCCCAAGGTCATTCCCTCAACTCATTCAACCTACTACTACAGTTGGAGCTCCACCTGCCACTGCCCCAGTATTTGTTGCCCCTTCCTTTATGATGCCTTCCATGATTCAAGCACATGTCCCTGCACCTCCAAAGCTCCAACCTGCATCCTCAGGCTCTATTGCCTCAATTCCTTTGCCTCATCCTTATGCTACTGGTCTCACCCAACCAATTAATATGGATATCCTCAACAACATGGCATCACTTTACCGACAACAGATGAGTCAGAACAACCATCAGGCCTTGAGCAGCAGCATGTCCCAACTACACCATGAGCAAGGCCGTTGA 1242 0.4654 MELQLKVSFLERPIGVEGESNYDEVAELIWENGHLSMHGLGGLQPTTTQEKPILSRAHDTLESMVQHATYQHYQPSKFTREVNAPSRINSVAAPYGEIQAVPSSTRKRTWSNSDYSGRNLGTNTNVLEECDILSGCASAGATFCRDNDTTMMTWASLESGRSLKTMEEDSACHCGSEIRDNQDDRDSKAEIGQGNSKRRSRTAAVHNQSERKRRDRINQKMKALQKLVPNASKTDKASMLDEVINYLKQLQAQIQMMNMTSMPQMMVPLAMQQQLQMSMLARMGAAGLGMGMGMVNINNMAAQTSGPRSFPQLIQPTTTVGAPPATAPVFVAPSFMMPSMIQAHVPAPPKLQPASSGSIASIPLPHPYATGLTQPINMDILNNMASLYRQQMSQNNHQALSSSMSQLHHEQGR 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15476g00001 413 Gene3D - 196 261 IPR036638 GO:0046983
Mupr15476g00001 413 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 199 261 IPR036638 GO:0046983
Mupr15476g00001 413 MobiDBLite consensus disorder prediction 175 215 - -
Mupr15476g00001 413 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 201 250 IPR011598 GO:0046983
Mupr15476g00001 413 SMART finulus 207 256 IPR011598 GO:0046983
Mupr15476g00001 413 MobiDBLite consensus disorder prediction 393 413 - -
Mupr15476g00001 413 MobiDBLite consensus disorder prediction 175 195 - -
Mupr15476g00001 413 CDD bHLH_AtPIF_like 201 263 IPR047265 -
Mupr15476g00001 413 FunFam transcription factor UNE10 isoform X1 196 261 - -
Mupr15476g00001 413 Coils Coil 207 227 - -
Mupr15476g00001 413 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 25 401 IPR031066 -
Mupr15476g00001 413 Pfam Helix-loop-helix DNA-binding domain 205 251 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15476g00001 Mupr-Chr15476 826 3897 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15476g00001 24 263 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 41.569 7.67e-40 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr15476g00001 HLH 1.8e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15476g00001 - - gmx:102667566 534.258