Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15455g00001 ATGATTCCAGCCTATCGCCATTCAGTATCTTCTTCTGTTATGCCTCTGGATCTTAACGAAGATCAAAACCACGAGCTCTTCAGTCCAAATCACCACGCTTCCTCTTCGTTTTCATCTCTATCATCATACCCTATTCTCTTCAACCCGCCAGATCAAGATCAAGAAGCTGGATCATACTACTGGGAACCAAAAAAGCACTTACCAAGTGATGAAGAGGCTGAGAAGATTATCCCTACTAGAGGATCATGGGATCACAAGGTGACAGGTTGGAAGAAAGAAGAGAGGAATATTGAGAACCATGAATCAGCTGCTGAGGATGGTTCGGCGAAGTGGATGTCTTCAAAGATGAGAATGATGCGGAAGATGATGGTGTCGGATCAAAGTGACGCATATATTGCAGACAACACTGCGCACAAGTTTGATGATCAGAAACAACCTCTCTCACCGCTTGGAACTGATAATAGCAGCAACAACTATTCAAACCACAGTAATAACGCTGTTAGGGTTTGTGCTGACTGTCACACCACCAAGACCCCTCTTTGGAGGAGTGGACCAAGAGGCCCCAAGTCACTTTGCAACGCCTGTGGGATTCGACAGAGGAAGGCGAGACGAGCGATGGCAGCTGCGGCTGCAGCATCGGGGAATGGAACAGTTGTGGTGGAAGCTGAGACATCTGTGAAGGGAAACAAGTTGAAGAAGAAAGAGAAGAAGTCAAGAACTGAGGGTGCACCACAGATGAAAAAGAAGCGCAAGCTTGGAGCCAAGCCTTCTTCTCAAAGTAGAAACAAGTTTGGTTTTGAGGATTTGACATTACGCTTAAGGAAGAACTTGGCTATGCATCAATTTTTCCCTCAGGACGAGAAAGAGGCTGCCATCCTGCTCATGGCTTTATCTTATGGCCTTGTTCATGGATGA 915 0.4612 MIPAYRHSVSSSVMPLDLNEDQNHELFSPNHHASSSFSSLSSYPILFNPPDQDQEAGSYYWEPKKHLPSDEEAEKIIPTRGSWDHKVTGWKKEERNIENHESAAEDGSAKWMSSKMRMMRKMMVSDQSDAYIADNTAHKFDDQKQPLSPLGTDNSSNNYSNHSNNAVRVCADCHTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAAAAAASGNGTVVVEAETSVKGNKLKKKEKKSRTEGAPQMKKKRKLGAKPSSQSRNKFGFEDLTLRLRKNLAMHQFFPQDEKEAAILLMALSYGLVHG 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15455g00001 304 ProSitePatterns GATA-type zinc finger domain. 170 195 IPR000679 GO:0006355|GO:0043565
Mupr15455g00001 304 SMART GATA_3 164 215 IPR000679 GO:0006355|GO:0043565
Mupr15455g00001 304 Pfam GATA zinc finger 170 203 IPR000679 GO:0006355|GO:0043565
Mupr15455g00001 304 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 163 204 - -
Mupr15455g00001 304 CDD ZnF_GATA 169 197 IPR000679 GO:0006355|GO:0043565
Mupr15455g00001 304 Gene3D - 160 253 IPR013088 GO:0006355|GO:0008270
Mupr15455g00001 304 FunFam GATA transcription factor 21 164 256 - -
Mupr15455g00001 304 MobiDBLite consensus disorder prediction 229 261 - -
Mupr15455g00001 304 ProSiteProfiles GATA-type zinc finger domain profile. 164 200 IPR000679 GO:0006355|GO:0043565
Mupr15455g00001 304 MobiDBLite consensus disorder prediction 229 248 - -
Mupr15455g00001 304 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 1 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15455g00001 Mupr-Chr15455 2308 3877 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15455g00001 108 304 C2C2-Gata Transcription Factor Family AT4G26150 42.534 7.67e-38 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mupr15455g00001 GATA 3.8e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15455g00001 - - gmx:100810698 416.001