Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1544g00009 ATGGCTATAACAAAATTGATACCGGGGTTTCGGTTTCATCCTAGTGGCGTTGAGTTAGTTGTGTACTTTCTGAAGAGGAAAGTGATGGGGAAAAAGTTCTGCGATGGTGTCATCACTGAACTTGACATTTACAAGTATGCTCCTTGGGATCTCCCAGACAAGTCTTGTTTGAGGACTGGAGAATTGGAATGGTACTTCTTCTGCTCGCTAGAGAAGAAATATGGCAGTGGGAGCAGGATGAACCGTGCTACTGAAATTGGATATTGGAAAGCTACTGGGAAGGATAGAGTTGTTCAGCACAATAATCAAACTGTGGGGATGATAAAAACACTGATATTTCATACTGGTAAATCGCCACATGGCGAAAGAACTAATTGGGTTATGCATGAGTATAGGCTTGAAGATAAGAACCTTGCCGAAGAGATTGCTCAGGATTCCTATGTAGTCTGCAAGGTATTCCAAAAGGAAGGTGTTGGTCCCAGGAATGGTGCACAATATGCGAGACCTTTTAATGAGGAAGACTGGGATGTCGAAGAACTGGAAATACCTTATCCTGCTTTGTCTGCACCAGTTCCCACCATTTCTATGGATTCTGATGCTTCTGTTCCAAATGAAAATCAGCTCCCCGGTAGTGTATGCATTGGTTTAACAGCCACATCATGTCTATCAGGATCAATGCCTTCTCCTGGCATAGTCAATCCTTCGGTTCCAAATGATCAAGCTGTTAACAATGATGATACTGATATTTTAGCAATGCTTGAAAATTTTAAAGATGATGGCAAATTGTTTGAGGTTTGTGCATCATTAGATGATTTTTTTGACGGCGTGGAAGCCTACTTGCCTGCGCTGGCTTCCTCTGGCCAGTATACTGAATTTAGCACAAACGGAATAGCGACTACCGGTGATGTCGGTAGCTCTGACGGCTTGGACTTCCTAGAATGGATTGACCTGGACACTCCATTGTTCCGGCCGATACCACAACCTTGA 987 0.4336 MAITKLIPGFRFHPSGVELVVYFLKRKVMGKKFCDGVITELDIYKYAPWDLPDKSCLRTGELEWYFFCSLEKKYGSGSRMNRATEIGYWKATGKDRVVQHNNQTVGMIKTLIFHTGKSPHGERTNWVMHEYRLEDKNLAEEIAQDSYVVCKVFQKEGVGPRNGAQYARPFNEEDWDVEELEIPYPALSAPVPTISMDSDASVPNENQLPGSVCIGLTATSCLSGSMPSPGIVNPSVPNDQAVNNDDTDILAMLENFKDDGKLFEVCASLDDFFDGVEAYLPALASSGQYTEFSTNGIATTGDVGSSDGLDFLEWIDLDTPLFRPIPQP 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1544g00009 328 ProSiteProfiles NAC domain profile. 6 155 IPR003441 GO:0003677|GO:0006355
Mupr1544g00009 328 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 188 - -
Mupr1544g00009 328 FunFam Nac domain-containing protein 86 15 158 - -
Mupr1544g00009 328 SUPERFAMILY NAC domain 4 155 IPR036093 GO:0003677|GO:0006355
Mupr1544g00009 328 Gene3D NAC domain 16 158 IPR036093 GO:0003677|GO:0006355
Mupr1544g00009 328 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1544g00009 Mupr-Chr1544 63620 66543 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1544g00009 1 321 NAC Transcription Factor Family AT5G09330 43.804 6.91e-85 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr1544g00009 NAM 1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1544g00009 - - gmx:100778933 449.129