Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15444g00001 ATGGCGACGACAAGGTCACCGAACCGTTCTTCCGAGGATGCCGCCGATCCGACGCCGTTCATCGGGACTTCCTCCACCGACGACTCCACTTCCGGCAGCCGTCTCCTCCGCCGCCCGAGCCTCCGGGAGGCGGCGCGGTTCCTGCGGCAGGCGAGCGGGCGGAGGCTGATGCGCGAGCCGTCCATGGTGGTGAGAGAGACGGCAGCGGAGCAACTGGAGGAGAGGCAGAGCGATTGGGCCTACTCGAAGCCCGTCGTGGTTTTGGACATTCTCTGGAACTTCGCCTTCGTGGTCGCGGCTGCAACGGTCATGATTCTCAGTCGCAATGAGAATCCAAACATGCCTCTCAGGTTGTGGATTGCAGGCTACGCTCTGCAGTGCGTTCTTCACGTCGTCTGCGTCTGCGTCGAGTACCGGAGGCGCCACCGTGCCCGGGAACATTCCGGTGCTGCCGACGTCAGCACCGCTGTCACGTTCCGCAGCAGTACGGATTTGATTTCGGCTTCAATGGACGGCTCTGGACAGTACGTGTCGTTGGAGCAGTTCGAAGACGACGGTGTAAGTATGGCAAAGCATTTGGAATCAGCCAACACAATGTTTTCGTTTATTTGGTGGGTTGTTGGATTCTATTGGGTATCAGCTGATAGTCAAGCTTTGGTCCAAGATTCTCCTCTGCTTTACTGGTTGTGTATAGTCTTTCTGGGTTTTGATGTTTTCTTTGTTGTTTTCTGTATTGCTCTGGCATGCATCATTGGTATTGCTGTTTGCTGTTGTCTTCCATGTATCATTGCGCTCCTGTATGCAGTTGCAGACCAGGAAGGGGCATCAAAAGAAGACATTGAGCAGTTGTCAAAATTCAAGTTCCAAAAACCTGAAACTAATGAGAAACTTGCTGTGAATACACAAGGAGCTGCTGGAGGAATAATGACTGAATGCAATGCTGATTCTCCCATTGAACATGTTCTTTCTGCTGAGGATGCGGAATGCTGCATCTGTCTTTCTGCTTATGATGATGGGGTTGAGCTTAGACAACTTCCTTGTGGTCACCATTTTCACTGTGCCTGTGTGGACAAATGGCTGTATATTAATGCTACTTGCCCCCTATGCAAGTATAACATCTTGAAAAGTACCAGTCATGGTCAAGACGAAGTGTAG 1155 0.5177 MATTRSPNRSSEDAADPTPFIGTSSTDDSTSGSRLLRRPSLREAARFLRQASGRRLMREPSMVVRETAAEQLEERQSDWAYSKPVVVLDILWNFAFVVAAATVMILSRNENPNMPLRLWIAGYALQCVLHVVCVCVEYRRRHRAREHSGAADVSTAVTFRSSTDLISASMDGSGQYVSLEQFEDDGVSMAKHLESANTMFSFIWWVVGFYWVSADSQALVQDSPLLYWLCIVFLGFDVFFVVFCIALACIIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFQKPETNEKLAVNTQGAAGGIMTECNADSPIEHVLSAEDAECCICLSAYDDGVELRQLPCGHHFHCACVDKWLYINATCPLCKYNILKSTSHGQDEV 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15444g00001 384 MobiDBLite consensus disorder prediction 1 37 - -
Mupr15444g00001 384 PANTHER TARGET OF ERK KINASE MPK-1 52 374 - -
Mupr15444g00001 384 CDD RING-H2_RNF6-like 328 370 - -
Mupr15444g00001 384 ProSiteProfiles Zinc finger RING-type profile. 329 370 IPR001841 -
Mupr15444g00001 384 MobiDBLite consensus disorder prediction 1 36 - -
Mupr15444g00001 384 Pfam Ring finger domain 328 370 IPR001841 -
Mupr15444g00001 384 SMART ring_2 329 369 IPR001841 -
Mupr15444g00001 384 SUPERFAMILY RING/U-box 319 377 - -
Mupr15444g00001 384 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 309 378 IPR013083 -
Mupr15444g00001 384 FunFam E3 ubiquitin-protein ligase At1g12760 315 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15444g00001 Mupr-Chr15444 3618 7859 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15444g00001 24 379 C3H Transcription Factor Family AT1G68070 49.584 3.25e-118 345