Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1543g00001 ATGGTTTGTGCCACTGCCACTGCCAGTGCCAGTGGCATAAGTGGGACCAACATCAACATCCATGGAAAGGGGCATCATTCATCATGGGACACACGGTTAACAAGACATAGGCCCAGAAGAACTTGCAACAACATATTTCAGATCTCTCTCTTTGCTTCCACTTCAGGGGTCAAAGTGAGGAATGCCAAGAAAATGGGGAGGAAGGGAAATTGGTTTTCTACTGTGAAGAAAGCTCTAAGCCCTGAGCCGAAGGAGAGGAACGATCAGAAATCAAGTAGATCAAAGAAGAAATGGTTTGGGAAACAAAAATTGCAGACTTCAGAATTGCACTCAGAAACTGATAAAACACCTCCTCTTCCTCCACCTGAGATTATTTTAACTCACGTTGTTGAGGGTGAAACCAGCCATGATCATATTGAAGTTGCAACTGAAGTGGATGCTAAGGAACCTGTTCCTGCTGTTCAGACAGCAGCTGCTGAGGTTCAACCCACTACAATTGTTCAGTTTAACAGTAAACCAACGGACGAAGTGGCAGCAATCAGAATTCAAAAAGCTTTTCGGGGATACTTGGCACGAAGAGCGTTGCGGGCTTTAAGAGGGCTGGTGAGGTTGAGATCGCTGATGGAAGGGCCGGTGGTAAAACGTCAAGCCATTAGTACCCTCCGTTCTATGCAAACTTTTGCTCATTTGCAAACTCAGATTCGTTCTAGAAGGCTCAGGATGTTAGAGGAGAATCAAGCTCTACAAAAACAGCTCTTACTGAAGCACACAAAAGAGCTAGAGAGCTTGCGGCTTGGGGAGGAATGGGATGACCGCATACAATCAAAAGAACAAGTTGAAGCCAAGTTACTGAGCAAGTATGAGGCTGCTATGAGAAGAGAAAGAGCAATGGCTTATTCATTCTCTCATCAGCAAAACTGGAAGAATTCATCAAGATCTATAAACCCAATGTTCATGGATCCAACGAATCCAACGTGGGGTTGGAGCTGGTTGGAACGATGGACGGCAGGCCGGCCCGGGGAGAACGACAATTCATCTCTAAGAAGTTCTAGCCGTGGCATTACCAGTGCGGAAATAAGCAAATCATTTGCTAAATTCCAGCTAAATTCAGAAAAGCATTCTCCAACAGCCAGCCAAATTCCAGAGTCACCTAACTTTGAGTCCCATTCAAATCTCCCCAAGGCACCTTCTCCAGCATTTGCTAGGAAAGTGAAGAAAGTGAGTCCAAAGGACATGTTGGCCATAGATGATGACACCAAAAGCATGTCAAGTGTGCAGTCAGAGCGGCCACGGAGGCACTCCATTGGTGGATCAACAGTGAGAGATGATGAAAGTCTTGCAAGCTCTCCAGCAATTCCAAGTTACATGGTGCCAACTAAATCTGCAAAGGCTAAGTCCAGGATGCAAAGTCCACTAGTTGCTGCTGCAGAGAATGGAACCCCAGAAAAAGGGTCCTCTGGAACTGCAAAGAAACGTCTTAGTTTCCCAGCTTCACCTGCCAGACCAAGGAGGCATTCAGGTCCACCAAAGGTAGAAAGCAGCTTCAATGCTGAAATCACTGTTGGAAATGGTGTTGCTGCTTGA 1584 0.4602 MVCATATASASGISGTNINIHGKGHHSSWDTRLTRHRPRRTCNNIFQISLFASTSGVKVRNAKKMGRKGNWFSTVKKALSPEPKERNDQKSSRSKKKWFGKQKLQTSELHSETDKTPPLPPPEIILTHVVEGETSHDHIEVATEVDAKEPVPAVQTAAAEVQPTTIVQFNSKPTDEVAAIRIQKAFRGYLARRALRALRGLVRLRSLMEGPVVKRQAISTLRSMQTFAHLQTQIRSRRLRMLEENQALQKQLLLKHTKELESLRLGEEWDDRIQSKEQVEAKLLSKYEAAMRRERAMAYSFSHQQNWKNSSRSINPMFMDPTNPTWGWSWLERWTAGRPGENDNSSLRSSSRGITSAEISKSFAKFQLNSEKHSPTASQIPESPNFESHSNLPKAPSPAFARKVKKVSPKDMLAIDDDTKSMSSVQSERPRRHSIGGSTVRDDESLASSPAIPSYMVPTKSAKAKSRMQSPLVAAAENGTPEKGSSGTAKKRLSFPASPARPRRHSGPPKVESSFNAEITVGNGVAA 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1543g00001 527 MobiDBLite consensus disorder prediction 404 427 - -
Mupr1543g00001 527 Pfam Protein of unknown function (DUF4005) 430 503 IPR025064 -
Mupr1543g00001 527 MobiDBLite consensus disorder prediction 79 110 - -
Mupr1543g00001 527 Pfam IQ calmodulin-binding motif 178 196 IPR000048 GO:0005515
Mupr1543g00001 527 MobiDBLite consensus disorder prediction 368 392 - -
Mupr1543g00001 527 Gene3D iswi atpase 173 199 - -
Mupr1543g00001 527 ProSiteProfiles IQ motif profile. 175 203 IPR000048 GO:0005515
Mupr1543g00001 527 MobiDBLite consensus disorder prediction 68 122 - -
Mupr1543g00001 527 MobiDBLite consensus disorder prediction 13 35 - -
Mupr1543g00001 527 PANTHER IQ-DOMAIN 5-RELATED 65 508 - -
Mupr1543g00001 527 SMART iq_5 174 196 IPR000048 GO:0005515
Mupr1543g00001 527 MobiDBLite consensus disorder prediction 368 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1543g00001 Mupr-Chr1543 6163 9740 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1543g00001 65 527 IQD Protein Family AT5G03040 50.104 4.06e-137 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1543g00001 - - gmx:100799058 750.74