Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1542g00002 ATGGCTGAGTTTAACGGCGCGATGGTGGAGAATAACAATGCGGAGGTGGTTCGGTGGGAGAGGTTTCTGCCTCGGATGGTGCTCACTGTGCTGCTTGTAGAAGCTGATCATGCCACTCGCCAAATCATCGCTGCACTTCTTCGCAAATGCAGTTACACAGTTATTGCAGTTCCTGATGGATTAAAGGCATGGGAAACGTTGCAGAGGAAGGCACCTGATCTAGATCTCATACTAACAGAAGTGGATTTGCCAGCAATATCTGGATTTGCACTTCTTTCTTTAATTATGGAGCATGACATTTGCAAAAACATTCCTGTCATAAGTATGTTGACTTGTTACTATGTTTATTCTCATGGGTGTGCAGTGATGTCTTCTCATGATTCGGTTAGCATGGTGTTGAAATGCACGTTAAAAGGGGCAGTTGATTTTCTTATAAAACCCATTCGGAGGAATGAGCTTAGGAACTTGTGGCAGCATGTATGGAGAAGGCACGCTATTAGCACTCCTCAAAATACAACATTTCCACAGAAAAAACTTAAAACTACCTCAGAAGACAATTCTGCAAGCAATAGATCTAGTGGTTCTGTGGCTTCCTCTGAGAAAAATAGTGGATGCAGTGGGAGATTGAGTGAGGCTCAACTTGAGGAAAGTATTCTTTATAGATTAGTTTTGCTTCGTGAAGTTTCACATAGAAACTACACATTTTTACAAACTCTTGTGCAGAGTACTTGTACATGGCCAATTTTGGAAGCTGAGAGTACATGCATGGAAAATATGCAGGATGTGCCCCAGCTGAATAGTTCTAAACTGAACAAAATTGATATGGTGAAGCATGAAGAGGTTACCAATTTCAAAAGGGAATTAGCAAAGCATAATGATGAAACAAGAGATAAATCAATTACAATTGTATCAGAGGCTACAAGGTGTGACAAAACTTTTGAATTGACAGATTTAAGGCTAGAACAAGACCATGGTTGTGCTGAAATAGAAAACGAGGATGAAATTTTAAAATCTGAGTTAGGAAGAGTCAATCCTAATATTAGTACTGAGATACATGGATGCAGTGATGAACGGGTAGAACCTTCTAAAAGAGTTATCGACTTGATTGCCACATTTGGGAATCTTCCAAAGCACCCTAATGAAAACTGTAGTTTCAATGATGGTAATACAACCAAGTTTGATTGTGATGCCCAGTTTGAACTTTCTTTAAGAAGTGATTTTCCAGGCAGCTCTTGTAAACAAGCAAGTGAAGCCACTGAGGAATCTCAAAGATTGAACCATTCAAATACTTCTGCCTTTTCTTGGTGA 1308 0.3976 MAEFNGAMVENNNAEVVRWERFLPRMVLTVLLVEADHATRQIIAALLRKCSYTVIAVPDGLKAWETLQRKAPDLDLILTEVDLPAISGFALLSLIMEHDICKNIPVISMLTCYYVYSHGCAVMSSHDSVSMVLKCTLKGAVDFLIKPIRRNELRNLWQHVWRRHAISTPQNTTFPQKKLKTTSEDNSASNRSSGSVASSEKNSGCSGRLSEAQLEESILYRLVLLREVSHRNYTFLQTLVQSTCTWPILEAESTCMENMQDVPQLNSSKLNKIDMVKHEEVTNFKRELAKHNDETRDKSITIVSEATRCDKTFELTDLRLEQDHGCAEIENEDEILKSELGRVNPNISTEIHGCSDERVEPSKRVIDLIATFGNLPKHPNENCSFNDGNTTKFDCDAQFELSLRSDFPGSSCKQASEATEESQRLNHSNTSAFSW 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1542g00002 435 Gene3D - 26 313 - -
Mupr1542g00002 435 SMART REC_2 28 157 IPR001789 GO:0000160
Mupr1542g00002 435 ProSiteProfiles Response regulatory domain profile. 29 161 IPR001789 GO:0000160
Mupr1542g00002 435 Pfam Response regulator receiver domain 30 155 IPR001789 GO:0000160
Mupr1542g00002 435 SUPERFAMILY CheY-like 28 170 IPR011006 -
Mupr1542g00002 435 PANTHER TWO-COMPONENT RESPONSE REGULATOR 29 272 IPR045279 GO:0009736
Mupr1542g00002 435 MobiDBLite consensus disorder prediction 172 206 - -
Mupr1542g00002 435 MobiDBLite consensus disorder prediction 407 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1542g00002 Mupr-Chr1542 27612 30579 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1542g00002 16 191 Response Regulator Gene Family AT5G24470 62.222 1.54e-69 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mupr1542g00002 Response_reg 1.7e-14 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1542g00002 K12130 - gmx:100802674 594.349