Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15427g00001 ATGGACATTTTCTCCAATCCTGAGATCATTCCGCATGTCTTCGACTCGTGGTGTTGCGACACAGACAACATAATGATGGAAGTTTCACCGCTAGAGGGTTTTTCCGAGCACGATTGGACACTGGAGTGGCCATATTCAAGCAACCAACTTTGCTTCAATGAGTTACCAGACATTGAAAATTTGAAGTTCGATTTTGACCTGCCACTCCTCGGCGAGGTGGAGCAAAAGCCCTCGAACATTGTTGTGCCCGAAAAGGGGCATTGCAATCGTGATGGTTTTGTTGCGATTGAAAATGGGTTTGCCAGTTGTGTGAAGAAAGAGGAGGTGGAGAAGGAGAATATTCATGAGAGGGTGTCATTATCAGTGCCTAGTGGAACTAGGAAGAAGAAGAAGTCGAGTGCGTTGGAATTTGACGAGATAAAGAAGCATTTTGATGTTCCTATAACTGAAGCCGCGAAGCAAATGAAGGTGGGCTTAACCCTTTTGAAAAGAAGGTGCAGGGAACTCAATATCATGAGGTGGCCCCATAGGAAACTCAAGAGTTTGACGTTACTCATCGACAATGTTAAGGAAATGGGTTTGGCAAACGAGGTTGCCATGTTGGAGAAGCATAAAACGATGTTGGAAAAATTACCAGGTTTGGAACTCAGTGAAGAAACCAAGAAACTGAGGCAGGCTTGTTTTAAAGCTAAATACAACAGGAGAAGATATTATTCGGCACTCCAACCTTGA 732 0.4399 MDIFSNPEIIPHVFDSWCCDTDNIMMEVSPLEGFSEHDWTLEWPYSSNQLCFNELPDIENLKFDFDLPLLGEVEQKPSNIVVPEKGHCNRDGFVAIENGFASCVKKEEVEKENIHERVSLSVPSGTRKKKKSSALEFDEIKKHFDVPITEAAKQMKVGLTLLKRRCRELNIMRWPHRKLKSLTLLIDNVKEMGLANEVAMLEKHKTMLEKLPGLELSEETKKLRQACFKAKYNRRRYYSALQP 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15427g00001 243 PANTHER PROTEIN RKD4 118 236 IPR044607 GO:0003700
Mupr15427g00001 243 Pfam RWP-RK domain 135 182 IPR003035 -
Mupr15427g00001 243 ProSiteProfiles RWP-RK domain profile. 118 203 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15427g00001 Mupr-Chr15427 882 1962 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15427g00001 135 236 AtRKD Transcription Factor Family AT5G53040 61.765 8.23e-38 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Mupr15427g00001 RWP-RK 4.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15427g00001 - - pvu:PHAVU_009G051600g 296.204