Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15414g00001 ATGAATTCTAAAAGAAGGCGTTTCAATAAAATGAAATCTTCCACCCAAATAAAAACTCATAAGTTGTATGCTGGCAATCTTGCTAAGACTGTTAGACCTGAACAGTTGAGAGATCTCTTTAGCAGATTTGGAAGTGTAGTCAGTGCAAGAGTATTGCATGATTATAAACATAGGAAAGGTCGAATCTATGCCTTGCTCTCCTTTCAATCGGAGGCAGATCGCGATGCAGCAATGTCTATCAATGGAACAGAATTTTGTGGTTGGAGACTAATCATTAAAATGGGTGTGTGGAAGACCGAGCCTTAA 306 0.3889 MNSKRRRFNKMKSSTQIKTHKLYAGNLAKTVRPEQLRDLFSRFGSVVSARVLHDYKHRKGRIYALLSFQSEADRDAAMSINGTEFCGWRLIIKMGVWKTEP 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15414g00001 101 PANTHER OS02G0815200 PROTEIN 16 89 - -
Mupr15414g00001 101 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 20 97 IPR000504 GO:0003723
Mupr15414g00001 101 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 22 87 IPR000504 GO:0003723
Mupr15414g00001 101 SUPERFAMILY RNA-binding domain, RBD 16 96 IPR035979 GO:0003676
Mupr15414g00001 101 Gene3D - 1 100 IPR012677 -
Mupr15414g00001 101 CDD RRM_SF 22 93 - -
Mupr15414g00001 101 SMART rrm1_1 21 93 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15414g00001 Mupr-Chr15414 7385 7765 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15414g00001 11 100 Eukaryotic Initiation Factors Gene Family AT2G36660 33.684 2.76e-07 45.1