Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15397g00001 ATGAATGTGACCCTAGAAGTGTTTGTGGCGACTTCAAGAGGTAGGAGTAAGCATATTTTCTCAATTTTGGGTGTGCCTCAAACTTTTCTCAATTATCATGATTGTGACATGGTTACAAACCTTTTAAGAATGTTACATGACTCAGTATTACGATGTCGTAGGGTTTCCAATTGTTTTTGCATGTTTGTTATGGTATTCAAAGACTGTTGTTGCTACAACATAGTGAAAACCCCATGCTTATTCTTTGTTGGTCAAAAAGTTCCATCACGTAAATTGGTTCAAAGAATGGCTTGTAATGGTGGTGAATATTCTTTGCCTGCGGGGGTAACGACACTTGAAAAATTCAAGGTTCAAGTCCATGAAGAGGACAATTGTAGCATATGTTTGGTAGAATTTAACTTGGGTGATGATGCAGCAAGATTGCCTTGTTCCCATATTTGTCACTATGATTGTATTTTGGAATGGTTTGTGCAAAGTGGTACATGTCCTATATGTCGTTTCACATGCAGTCGTGTCTCTCGTTAG 525 0.381 MNVTLEVFVATSRGRSKHIFSILGVPQTFLNYHDCDMVTNLLRMLHDSVLRCRRVSNCFCMFVMVFKDCCCYNIVKTPCLFFVGQKVPSRKLVQRMACNGGEYSLPAGVTTLEKFKVQVHEEDNCSICLVEFNLGDDAARLPCSHICHYDCILEWFVQSGTCPICRFTCSRVSR 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15397g00001 174 ProSiteProfiles Zinc finger RING-type profile. 125 166 IPR001841 -
Mupr15397g00001 174 PANTHER SI:CH211-59O9.10 116 168 - -
Mupr15397g00001 174 SUPERFAMILY RING/U-box 112 170 - -
Mupr15397g00001 174 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 103 171 IPR013083 -
Mupr15397g00001 174 SMART ring_2 125 165 IPR001841 -
Mupr15397g00001 174 Pfam Ring finger domain 123 166 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15397g00001 Mupr-Chr15397 6358 6945 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15397g00001 87 167 C3H Transcription Factor Family AT1G14200 35.227 1.02e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15397g00001 - K11982 aprc:113862471 174.096