LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr15383g00001	ATGGAGCGTGTTTTGGAAAAAAGGTTTCCTCTTAGTGCTGAAGATTACAAGTTGTATGAAGAAGTTGGTGAAGGCGTTAGTGCCTCTGTATTCAGGGCTCTCTGCATTCCACTCAATGAAATAGTTGCCATCAAGGTTCTCGATCTAGAGAAGTGCAATAATGATTTGGATGGCATTCGGAGAGAGGTACAGACCATGAGCTTGATTGATCATCCAAATGTTTTACGGGCACATTGCTCTTTCACTGCTGGACACAATCTATGGGTTGTGATGCCATACATGGCTGGAGGGTCTTGCCTTCATATAATGAAATCTACCTATCCTGAGGGTTTTGAAGAGCCTGTTATTGCTACTTTATTGCTTGAAGTTCTCAATGCTCTTGTCTATCTTCATGCCCATGGTCACATACATAGAGATGTTAAGGCTGGGAATATTCTGCTTGATTCTAATGGTGCAGTCAAACTAGCTGACTTTGGAGTGTCAGCATGTATGTTTGATACTGGAGATAGGCAACGTTCTAGAAACACTTTTGTTGGAACACCTTGCTGGATGGCTCCTGAAGTCATGCAGCAATTACATGGATATGATTTTAAAGCAGATATATGGTCATTTGGTATAACAGCACTTGAACTTGCTCATGGTCATGCCCCATTTTCCAAGTATCCACCAATGAAAGTTTTGCTTATGACTTTACAAAATGCCCCTCCAGGTCTTGATTATGAAAGAGACAAGAGGTTTTCAAAGTCTTTCAAAGAATTGGTTGCTACCTGCTTAGTAAAAGACCCAAAAAAGCGTCCAAGTTCAGAAAAGCTTTTAAAGCACCACTTCTTTAAACAAGCGCGTGGCATCAAATATCTAGCTCGCACCATTCTAGATGGCCTTGCTCCTTTGGGTGATCGTTTTAGAATGCTGAAGGCTAAAGAGGCAGATTTGTTGGTACAGAATAAGGCTCTTTATGAGGATAAGGAGCAATTATCTCAGAAAGAATATATTCGAGGAATTAGTGCCTGGAATTTTAACCTGGAGGATTTAAAAAGTCAAGCTGCTCTAATTCAAGATGATGACATACCTAATGCAGAAGAGCCACATAGGGATAAGAAGCAAAAAGACAGATTGGATGACTTCAGGGTTCCTGGAGAGGAGCTACCTGCTGTAGCAGCTAATCATTCAGATGGTGCACCCATGCCAGACAAGGAGGATGGATTCAACAATCTTCAGGATTTGGAATGTTCACTTGCTTCATTTCCTATTAAACCTCTTCAAGCACTGAAAGGATGTTTTGATATGTATGAGGACGACGTTAATAACAGCAGTCCAAGAGATTCAGATCATGATTATGGAAGAATTGACAATGAAAGTTCTGGGCCAAGTACTTCATTACAACAAAATGCTATCACTCAGCAAAAAAAGTTTCCGAGTGGTTCTTTGCTACCTGATAATTTTCTATACCCCAAAAAGGTTGCTACTGATGGGGACAGGGATTATCTACAAACAAAATATTCTTCGGAGAGGAATCACAGTGGTCCATTGCAGTATAGACAGAAGAGAGATACCAACAACCTTCCATTGGTTGATGACACATCAGAAGGAGCATTTGTCCAGCGTAGGGGGCGGTTTAAGGTCACATCAGCAGATCTCAGTCCAATGGGTCCTTCAAACAGCACTTCTGGCCCAGTTGTTAGTCCTACCAGTCCGCCTAATCAAACTTTCATGGCTGCTGCTGTTCTTCCATCACTGCAGTGCATCTTGCAACAGAACGGTTTGCAGAGGGAAGAGATTATTAAATTAATAAAGTATGCAGAGCAATCTTCTGGCAAGAACACAGGATCAATGGAGGTGGGGACAGCTGATATTTTGCAGGTGCCACCTGCAACAACTAGGGAGCGAGAGCTGCATTTTCAGGTGCTTCAACTCCAACAGAGCATTGGGAGCCTTGTTGAGGAATTGCAAAGACAAAAGATGAAAAATGTTCAGTTAGAGAAACAGTTGAGCGGTATGGTTAACAAAGTGGAGAAGTGA	2019	0.4185	MERVLEKRFPLSAEDYKLYEEVGEGVSASVFRALCIPLNEIVAIKVLDLEKCNNDLDGIRREVQTMSLIDHPNVLRAHCSFTAGHNLWVVMPYMAGGSCLHIMKSTYPEGFEEPVIATLLLEVLNALVYLHAHGHIHRDVKAGNILLDSNGAVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKELVATCLVKDPKKRPSSEKLLKHHFFKQARGIKYLARTILDGLAPLGDRFRMLKAKEADLLVQNKALYEDKEQLSQKEYIRGISAWNFNLEDLKSQAALIQDDDIPNAEEPHRDKKQKDRLDDFRVPGEELPAVAANHSDGAPMPDKEDGFNNLQDLECSLASFPIKPLQALKGCFDMYEDDVNNSSPRDSDHDYGRIDNESSGPSTSLQQNAITQQKKFPSGSLLPDNFLYPKKVATDGDRDYLQTKYSSERNHSGPLQYRQKRDTNNLPLVDDTSEGAFVQRRGRFKVTSADLSPMGPSNSTSGPVVSPTSPPNQTFMAAAVLPSLQCILQQNGLQREEIIKLIKYAEQSSGKNTGSMEVGTADILQVPPATTRERELHFQVLQLQQSIGSLVEELQRQKMKNVQLEKQLSGMVNKVEK	672

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr15383g00001	672	SUPERFAMILY	Protein kinase-like (PK-like)	14	278	IPR011009	-
	Mupr15383g00001	672	MobiDBLite	consensus disorder prediction	543	564	-	-
	Mupr15383g00001	672	Gene3D	Transferase(Phosphotransferase) domain 1	97	293	-	-
	Mupr15383g00001	672	MobiDBLite	consensus disorder prediction	434	450	-	-
	Mupr15383g00001	672	Gene3D	Phosphorylase Kinase; domain 1	5	92	-	-
	Mupr15383g00001	672	Coils	Coil	642	669	-	-
	Mupr15383g00001	672	MobiDBLite	consensus disorder prediction	451	472	-	-
	Mupr15383g00001	672	MobiDBLite	consensus disorder prediction	356	376	-	-
	Mupr15383g00001	672	SMART	serkin_6	16	277	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr15383g00001	672	Pfam	Protein kinase domain	16	277	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr15383g00001	672	MobiDBLite	consensus disorder prediction	354	376	-	-
	Mupr15383g00001	672	ProSiteProfiles	Protein kinase domain profile.	16	277	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr15383g00001	672	PANTHER	SERINE/THREONINE-PROTEIN KINASE FRAY2	7	653	IPR047173	GO:0043539
	Mupr15383g00001	672	MobiDBLite	consensus disorder prediction	434	472	-	-
	Mupr15383g00001	672	FunFam	Serine/threonine-protein kinase BLUS1	5	93	-	-
	Mupr15383g00001	672	ProSitePatterns	Protein kinases ATP-binding region signature.	22	45	IPR017441	GO:0005524
	Mupr15383g00001	672	MobiDBLite	consensus disorder prediction	546	564	-	-
	Mupr15383g00001	672	FunFam	serine/threonine-protein kinase BLUS1 isoform X1	97	330	-	-
	Mupr15383g00001	672	CDD	STKc_OSR1_SPAK	14	277	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr15383g00001	Mupr-Chr15383	14597	24097	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr15383g00001	1	669	MAP Kinase Kinase Kinase Kinase	AT5G14720	66.521	0.0	931

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE20-Fray	Mupr15383g00001		Pkinase	1.1e-58	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr15383g00001	K08835		-	gmx:100784402	1211.44