Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15373g00003 ATGGGAAGAGCTCCTTGCTGTGACAAAGTGGGGTTGAAGAAAGGAAGATGGACTGCTGAAGAGGATAAACTCTTAACCGATTACATCCAAGAAAATGGTGAAGGATCATGGAAGTCCTTGCCCAAGAATGCAGGTTTGATGAGGTGTGGGAAGAGTTGTAGGCTGAGATGGATCAACTATTTGAGAGCAGACGTGAAAAGAGGGAACATCACTCCTGAGGAAGAGGAGATGATTGTGAAGTTGCATGCTGTTCTGGTTAAAAAACATTTTGGTTGTAGGTGGTCAGTGATAGCTGGACATTTACCAGGAAGAACAGACAATGAGATAAAGAACTATTGGAACTCTCACTTGAGGCGAAAGATATATTGTTTCATGAGATCTTTGAACGAGTCTCTGCCACCCATTGACATGGCCACTGTAAACTCTGTGGCATCAAAAAGAAGAGGTCGCGGGCCAAGAAACAAGCCAGCCACGGAAGAGGAAAAGAACACGGCTCTGAGCCAAAACTCCTTCGAGTCAATGCCTTGTTGTAACACAGAAGAAGCTGAAGAAATTTCCATGATTGATGCTTGTTACGAAATGGAGGGCAATAGTAGCACAGTTGCATCATACCCAAGTCTTGAAGGCCTGGGACCATACCAACGTTGGAATGACGATGAAATTATGAGACTTAGTCAAATGTTTGAAAATGGGGTGCTTGTGAATCCAAGTGGTAATGTGGCCCTTAAGGATGAGCCTAGTGGAAATGAATGTGACCAGATTATGCATGTGGACGTAATGGGAACGGGTCAAAAGATCAAGAATGGTGTTTGGAATTGGAACTCAGCAAATGGGGACAGTGGAGAATGGTATCCCAATTGTTCATCACTCAACTCTGCCATTGATTATCAGTGGTCTGATTGGGACATGGCAGGTAGTGTTCAGTCCGATAATCAGTGGGATCTTTGTGATGATCACCAAATTATCAATTGCTTGTGGGGTACTGGCATTGGTGAAATAAACGCTTCATCAGATAAAGCTGGGGTA 1026 0.4386 MGRAPCCDKVGLKKGRWTAEEDKLLTDYIQENGEGSWKSLPKNAGLMRCGKSCRLRWINYLRADVKRGNITPEEEEMIVKLHAVLVKKHFGCRWSVIAGHLPGRTDNEIKNYWNSHLRRKIYCFMRSLNESLPPIDMATVNSVASKRRGRGPRNKPATEEEKNTALSQNSFESMPCCNTEEAEEISMIDACYEMEGNSSTVASYPSLEGLGPYQRWNDDEIMRLSQMFENGVLVNPSGNVALKDEPSGNECDQIMHVDVMGTGQKIKNGVWNWNSANGDSGEWYPNCSSLNSAIDYQWSDWDMAGSVQSDNQWDLCDDHQIINCLWGTGIGEINASSDKAGV 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15373g00003 342 FunFam Myb transcription factor 11 67 - -
Mupr15373g00003 342 SMART sant 66 119 IPR001005 -
Mupr15373g00003 342 SMART sant 13 63 IPR001005 -
Mupr15373g00003 342 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Mupr15373g00003 342 CDD SANT 16 61 IPR001005 -
Mupr15373g00003 342 Gene3D - 13 66 - -
Mupr15373g00003 342 MobiDBLite consensus disorder prediction 143 167 - -
Mupr15373g00003 342 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 121 IPR017930 -
Mupr15373g00003 342 Pfam Myb-like DNA-binding domain 67 117 IPR001005 -
Mupr15373g00003 342 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mupr15373g00003 342 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mupr15373g00003 342 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 184 - -
Mupr15373g00003 342 SUPERFAMILY Homeodomain-like 11 113 IPR009057 -
Mupr15373g00003 342 CDD SANT 71 117 IPR001005 -
Mupr15373g00003 342 Gene3D - 71 121 - -
Mupr15373g00003 342 ProSiteProfiles Myb-like domain profile. 62 117 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15373g00003 Mupr-Chr15373 21593 25967 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15373g00003 1 321 MYB Transcription Factor Family AT5G49330 42.817 1.36e-73 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr15373g00003 Myb_DNA-binding 1.2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15373g00003 K09422 - gmx:100819041 565.074