Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15371g00002 CTGCAGCCAGCAGCTGTTCTGACCGTCAATGATACGTCACAATTTGAGAAGCTTTTGCATCTGCGGGATCTTGAAAGAGGGGTGGACATTCTTGTTGCAACTCCTGGAAGACTGGTAGATTTGCTGGAGAGAGCTAGAGTTTCACTGCAGATGATTCGATATCTGGCCTTAGATGAGGCAGATCGGATGCTGGATATGGGTTTTGAGCCGCAAATAAGGAAGATTGTAGAACAAATGGACATGCCTCCACCAGGTGTCAGACAGACTATGTTGTTCAGTGCAACATTTCCGAAAGAGATACAGAGATTGGCTTCTGATTTCCTTTCAAGTTATATTTTCCTTGCTGTTGGAAGAGTGGGTTCAAGTACTGATTTAATCATCCAAAGAGTTGAGTATGTTCAAGAGTCTGACAAGAGAAGTCACCTAATGGACCTTCTTCATGCACAGAGGGCAAATGGTGTACAAGGAAAGCAAGCTTTGACTTTAGTTTTTGTGGAGACAAAGAAGGGAGCTGATTCACTAGAACACTGGTTGTGTCTTAATGGTTTTCCTGCAACTACTATTCATGGCGACAGATCACAGCAGGAAAGAGAATTAGCATTGAGGTCATTTAAAAGTGGCAACACCCCCATATTGGTTGCCACTGATGTTGCTGCACGTGGTCTTGATATTCCCCATGTTGCTCATGTGGTCAACTTTGACCTGCCAAATGATATTGATGATTATGTACACCGAATTGGAAGAACAGGACGAGCTGGAAAGAAAGGCCTTGCAACTGCATTCTTTAATGATAACAATTCATCACTAGCTAGAGCTTTAGCAGATCTGATGCAAGAAGCAAATCAAGAAGTACCTGCTTGGCTCTCACGGTATGCTGCTCGATCTTCATTTGGAGGGAGGAACCGCAGATCAGGTGGTCGATTTGGTAGCCGTGACTTCCGAAGAGATGGCTCTTCTGGTAGAGGTGGTTCAGATTACCATGGTGGAGGAAACAGCAATGCTGGTGGATATGGTGGAGGCTCTGGTGGGTATTCTGGAGGATATGGTCCTGGCATAGCTCGAGGTCGTTAA 1071 0.45 LQPAAVLTVNDTSQFEKLLHLRDLERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPKEIQRLASDFLSSYIFLAVGRVGSSTDLIIQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLVFVETKKGADSLEHWLCLNGFPATTIHGDRSQQERELALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNDNNSSLARALADLMQEANQEVPAWLSRYAARSSFGGRNRRSGGRFGSRDFRRDGSSGRGGSDYHGGGNSNAGGYGGGSGGYSGGYGPGIARGR 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15371g00002 356 Gene3D - 4 116 IPR027417 -
Mupr15371g00002 356 SMART helicmild6 172 253 IPR001650 -
Mupr15371g00002 356 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 23 292 - -
Mupr15371g00002 356 MobiDBLite consensus disorder prediction 297 356 - -
Mupr15371g00002 356 Gene3D - 117 296 IPR027417 -
Mupr15371g00002 356 FunFam ATP-dependent RNA helicase RhlB 116 296 - -
Mupr15371g00002 356 Pfam Helicase conserved C-terminal domain 138 253 IPR001650 -
Mupr15371g00002 356 CDD SF2_C_DEAD 126 262 - -
Mupr15371g00002 356 MobiDBLite consensus disorder prediction 305 321 - -
Mupr15371g00002 356 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 270 IPR027417 -
Mupr15371g00002 356 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 114 IPR014001 -
Mupr15371g00002 356 Pfam DEAD/DEAH box helicase 20 103 IPR011545 GO:0003676|GO:0005524
Mupr15371g00002 356 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 125 292 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15371g00002 Mupr-Chr15371 12384 17622 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15371g00002 21 285 Eukaryotic Initiation Factors Gene Family AT3G19760 34.586 9.09e-46 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15371g00002 K11594 - gmx:100795756 531.561