Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15368g00001 ATGTACAACCCGGCGGCGGCGAGTAGGAGCGTCCTGGCGTCTCGGACGAGTTCGCGGTCGGTGACGGAGACGGTGAACGGTTCGCACAAGTTCGTTATCAAGGGTTACTCTCTGGCGAAGGGAATCGGCGTCGGAAAACACATAGCCAGCGAGACTTTCACGGTGGGAGGTTACCAGTGGGCCATATACTTTTACCCCGACGGCAAGAACCCCGAAGATAACTCCGCTTATGTCTCCGTCTTCATCGCACTCGCTTCCGAGGGCACCGATGTTCGCGCGCTCTTCGAACTCACCTTGCTCGACCAGAGTGGTAACGGCAAGCACAAGGTTCATAGCCACTTCGATCGCGCCCTCGAGAGTGGACCCTACACTCTCAAATACAGAGGCAGCATGGGGTATAAGCGGTTTTTCAAGCGGGTTCAGCTCGAGGCGTCGACTTTTCTCAAGGATGACTGCTTGAAGATAAACTGCACTGTTGGTGTTGTGGTTTCGTCCATAGATTGTTCTAAGTTAAATGCAATACAGGTTCCCGAGTCTGATATTGGGGCGCATTTTGGGATGCTGTTAGAGAATGAGGAGGGGTCTGATGTTACTTTCTCTGTCGATGGAGAAAGATTTCATGCACATAAGCTTGTCTTGGCTGCTCGATCAACTGCATTTGAAACTGAGTTTTTCAATGGGATGGAACAAGATGATTGTGACATAGTTGTTACTGACATGGAACCTAAGGTTTTCAAGGCTTTGCTTCATTTTATTTATAGAGACACTCTTATTGAAGATGAAGAGCTCTTTATGTCACGTTCGTCATTCCTGCCTTCAGTATCTGAATCATTTCCAGCAAAGTTGTTAGCTGCTGCAGAAAAGTATGGTTTGCCAAGACTCAAGCTGCTGTGCGAATCTGTACTTTGCAAAGACATATCTATAGATTCTGTTGCCTATATTCTGGCTCTTGCTGATCGTTATCAAGCTACAGAATTGAAATCAGTCTGTCTACAATTTTCTGCTGAAAACCTTGTTGCTGTGATGCAATCTGATGGTTTCGAGTATCTTAAGGAGAATTGTCCATTGCTGCAATCAGAACTGCTAAAGACTGTGGCAGGATGTGAGGAGGAATTTAGTGGAGAAGGAAAATGTCCAAGTGTGTGGGCCCAATTTTCTGATGGTGGTGACACCAATGACAGGAGTGTAAGACAACAAACCTGGGAAAATGGAGTCGAAAGAAGTCAAAGCTTATGGGTTCACCTTTCTGATGGTGTTAACAACAATGATAGGGGTCCAGGGCAAGAACCTTGA 1293 0.4671 MYNPAAASRSVLASRTSSRSVTETVNGSHKFVIKGYSLAKGIGVGKHIASETFTVGGYQWAIYFYPDGKNPEDNSAYVSVFIALASEGTDVRALFELTLLDQSGNGKHKVHSHFDRALESGPYTLKYRGSMGYKRFFKRVQLEASTFLKDDCLKINCTVGVVVSSIDCSKLNAIQVPESDIGAHFGMLLENEEGSDVTFSVDGERFHAHKLVLAARSTAFETEFFNGMEQDDCDIVVTDMEPKVFKALLHFIYRDTLIEDEELFMSRSSFLPSVSESFPAKLLAAAEKYGLPRLKLLCESVLCKDISIDSVAYILALADRYQATELKSVCLQFSAENLVAVMQSDGFEYLKENCPLLQSELLKTVAGCEEEFSGEGKCPSVWAQFSDGGDTNDRSVRQQTWENGVERSQSLWVHLSDGVNNNDRGPGQEP 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15368g00001 430 SMART BTB_4 195 306 IPR000210 GO:0005515
Mupr15368g00001 430 SUPERFAMILY TRAF domain-like 23 164 - -
Mupr15368g00001 430 CDD MATH 27 159 IPR002083 GO:0005515
Mupr15368g00001 430 CDD BACK_AtBPM-like 303 364 IPR034090 -
Mupr15368g00001 430 Gene3D Potassium Channel Kv1.1; Chain A 171 300 IPR011333 -
Mupr15368g00001 430 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 25 163 IPR008974 GO:0005515
Mupr15368g00001 430 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 16 362 IPR045005 GO:0016567
Mupr15368g00001 430 ProSiteProfiles MATH/TRAF domain profile. 26 159 IPR002083 GO:0005515
Mupr15368g00001 430 Pfam BTB/POZ domain 187 304 IPR000210 GO:0005515
Mupr15368g00001 430 Gene3D - 305 378 - -
Mupr15368g00001 430 MobiDBLite consensus disorder prediction 388 430 - -
Mupr15368g00001 430 CDD BTB_POZ_BPM_plant 181 303 - -
Mupr15368g00001 430 SMART math_3 31 142 IPR002083 GO:0005515
Mupr15368g00001 430 SUPERFAMILY POZ domain 175 304 IPR011333 -
Mupr15368g00001 430 ProSiteProfiles BTB domain profile. 195 261 IPR000210 GO:0005515
Mupr15368g00001 430 FunFam BTB-POZ and math domain 1 171 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15368g00001 Mupr-Chr15368 7254 10550 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mupr15368g00001 BTB 2.2e-25 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15368g00001 K10523 - gmx:100809683 806.979