Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1535g00008 ATGAGCACACACCCAAAGAGAAAAGCAAAAACACAGCATGTTTACCTTTACCTTCTCTTTCAGTTATTGATTATCACGAGAGTACAAGGTAGCTGCTTCAGTGGGTGCAACCTTGCGCTAGCTTCCTATTACATAAGCCAAGGCACAAACCTCACTTACATTAGCAAGCTCTTTGGGAGGTCCACATCGGAGATTCTGAAATACAACCCAAGAGTGAGAAGCCAAGACGTGATTCAAAGCCAAACACGGATCCGCGTGCCCTTCTCGTGTGATTGCTTGAACGGTGACTTTTTGGGACACACATTCTCGTACGAAACCCAACACGGAGACACATACACAGTAATTGCCAAGGTTGATTTCGCAAACCTCACCTCCGAGGATTGGGTGAGCAGGGTCAACAGTTACCCACCTAATCAGATGCCCGACGGCGTCAACATCAACGTCACCCTCAACTGCTCCTGCGGAAACCGACACGTGTCCAAGGATTATGGCCTTTTCATGACCTACCCGCTTCTCTCAGGTGACAACTTGCAGAGCGTTGCGGCGGACTCCGGTGTGCCGCCGGAGCTGGTGCTGAGGTACAACCCCACCTCGGATTTCACTGCTGGGAATGGACTCGTCTTTGTGCCGGCTAAAGGAATATCTGGTGGAGCCATTGCTGGCATAGCTGTTGGAGGTGCTGTTGGGATCTTACTTTTGGCACTTATTCTATATGTTGTGGACTATACAGAAGAAAGAAAGTGGCTGAGGTATCCCTTCTCCCAGTCCCAGGAGCGTTTGAAGATCAGTGTAGTCCACTCCATCATGATTTCAGATTTAAAAAATAATAAATGTGAAACTACAAGTGTTATCTGTTCCATGGATTTAGGTTGTGGAAGCAGCTTGGACAAGGCATCAGAATCTTCTGTTGTTGCCTCTCCAAGGTTGACAGGGATTACAGTGGACAAGTCAGTGGAGTTCTCATATGAAGAGCTAGCCAAGGCTACTGATGCCTTTAGTGTGGCTAATATAATTGGAAAAGGTGGTTTTGGATCTGTTTACTATGCTGAGCTTCGGAACGAGAAAGCTGCAATTAAAAAGATGGATATGCAAGCATCAAATGAATTCCTTGCAGAACTAAAGGTTCTGACACATGTCCATCACTTGAACTTGGTGAGGTTAATAGGATATTGTGTTGAGGGCTCCTTATTTTTGGTTTATGAGTATATTGAGAACGGCAATTTAAGCCAACATTTGCGAGGAGGCTCAGGGAGGGATCCATTAACATGGGCAGCTAGAGTTCAAATTGCCCTGGATTCAGCAAGAGGACTGGAATACATCCATGAGCATACAGTTCCTGTCTACATCCACAGAGATATTAAATCAGCAAACATTTTGATAGACAAAAACTTCCGTGCAAAGGTTGCAGATTTTGGTCTCACAAAATTGACCGAGTATGGTAGTTCTTCATTACAAACCCGTCTTGTGGGCACATTTGGTTATATGCCTCCAGAATATGCACAATATGGTGATGTTTCCCCCAAAATAGATGTATATGCTTTTGGAGTTGTTCTCTATGAACTCATATCAGGCAAGGAAGCTATCGTCAAGACAAACGAACCTGAGAATGAATCAAAAGGACTAGTGGCCTTGTTTGAAGAAGTTCTTGGTATGTCAGATCCAAAAGAAGATCTTCGTCAACTTGTTGACCCTAGACTTGACATCTACCCTCTTGACTCGGTATTTAAGGTGTCTCAGCTTGCCAAAGCATGTACACATGAAAACCCTCAACTTAGGCCAAGCATGAGATCAATTGTAGTTGCCTTAATGACGCTTTCATCTGCAACTGAGGATTGGGATGTTGGCTCCTTCTATGAAAATCAAGCTTTAGTTCATCTAATGTCAGGA 1887 0.4446 MSTHPKRKAKTQHVYLYLLFQLLIITRVQGSCFSGCNLALASYYISQGTNLTYISKLFGRSTSEILKYNPRVRSQDVIQSQTRIRVPFSCDCLNGDFLGHTFSYETQHGDTYTVIAKVDFANLTSEDWVSRVNSYPPNQMPDGVNINVTLNCSCGNRHVSKDYGLFMTYPLLSGDNLQSVAADSGVPPELVLRYNPTSDFTAGNGLVFVPAKGISGGAIAGIAVGGAVGILLLALILYVVDYTEERKWLRYPFSQSQERLKISVVHSIMISDLKNNKCETTSVICSMDLGCGSSLDKASESSVVASPRLTGITVDKSVEFSYEELAKATDAFSVANIIGKGGFGSVYYAELRNEKAAIKKMDMQASNEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLSQHLRGGSGRDPLTWAARVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGSSSLQTRLVGTFGYMPPEYAQYGDVSPKIDVYAFGVVLYELISGKEAIVKTNEPENESKGLVALFEEVLGMSDPKEDLRQLVDPRLDIYPLDSVFKVSQLAKACTHENPQLRPSMRSIVVALMTLSSATEDWDVGSFYENQALVHLMSG 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1535g00008 629 CDD STKc_IRAK 338 599 - -
Mupr1535g00008 629 FunFam LysM receptor kinase 2 311 402 - -
Mupr1535g00008 629 Gene3D Phosphorylase Kinase; domain 1 313 402 - -
Mupr1535g00008 629 ProSiteProfiles Protein kinase domain profile. 332 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1535g00008 629 FunFam PTI1-like tyrosine-protein kinase 3 403 616 - -
Mupr1535g00008 629 SUPERFAMILY Protein kinase-like (PK-like) 312 602 IPR011009 -
Mupr1535g00008 629 SMART serkin_6 332 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1535g00008 629 Pfam Protein tyrosine and serine/threonine kinase 335 601 IPR001245 GO:0004672|GO:0006468
Mupr1535g00008 629 Gene3D Transferase(Phosphotransferase) domain 1 403 614 - -
Mupr1535g00008 629 ProSiteProfiles LysM domain profile. 41 86 IPR018392 -
Mupr1535g00008 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Mupr1535g00008 629 ProSitePatterns Protein kinases ATP-binding region signature. 338 360 IPR017441 GO:0005524
Mupr1535g00008 629 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 15 616 IPR044812 GO:0019199|GO:0045087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1535g00008 Mupr-Chr1535 67569 75550 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1535g00008 16 629 Receptor kinase-like Gene Family AT3G21630 53.292 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mupr1535g00008 PK_Tyr_Ser-Thr 1.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1535g00008 - K13429 gmx:100802308 962.6