Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1535g00001 ATGGAGGGTGGTAGTTCTAATGGCACTTCTTATTTGTTGGCTTTTGGAGAAAACAGTGGTGGGCTATGCCCAATGACGATGATGCCTTTGGTGACTTCCCATCATGCTGGTCATCATCCAATAAATCCTAATCCTAGTAATAATTCTAATAATAATGCAAACACAAACTGTCTCTTCATTCCCAACTGCAGTAACAGTGGAACTCCTTCTATCATGCTCGACAATAACCACAACAACACCGATAACAACGACAACAACAACACTGCGTTAGGGTACTATTTCATGGAGAGTGACCACCATCGCAACAACAACAATGGAAACTCCTCCTCCTCCTCTTCTTCTGCTGTCAAGGCTAAGATCATGGCTCATCCTCACTATCACCGTCTCTTGGCAGCCTACGTCAATTGTCAGAAGGTTGGAGCCCCTCCTGAAGTGGTGGCAAGGTTAGAGGAAGCATGTGCTTCTGCAGTGACAATGGCAGGTGATGCAGCTGGATCAAGCTGCATAGGTGAAGATCCTGCTTTGGATCAGTTCATGGAGGCTTACTGTGAGATGCTGACCAAGTACGAGCAAGAACTCTCTAAACCCTTAAAGGAAGCCATGCTCTTCCTTCAAAGGATCGAGTGCCAGTTCAAAAATCTTACAATTTCTTCCTCCGACTTTGTCACATTCTCGTCAACTATTTCTCCATTTGATTTTTACCGGGATTCTCAGATTTTACTTGAAATGAATCGGAAGATAGATGAAAGTGCAGATGGAAGCTTGCCGGTGAATTTAGGTCTGGTAAATAACCTAGGGATTAGGGTTTCTTTTGCACTGGTGCCCTGGGGTGGTAATTGCGGGGTAGGGAGTTGGCTAGATACTCATTGGAAACGTAATATGCAGACAAAAAGTCGCAGTAAAGAGCTGAAGTTCTTTGGGGATAAGTGA 930 0.4441 MEGGSSNGTSYLLAFGENSGGLCPMTMMPLVTSHHAGHHPINPNPSNNSNNNANTNCLFIPNCSNSGTPSIMLDNNHNNTDNNDNNNTALGYYFMESDHHRNNNNGNSSSSSSSAVKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACASAVTMAGDAAGSSCIGEDPALDQFMEAYCEMLTKYEQELSKPLKEAMLFLQRIECQFKNLTISSSDFVTFSSTISPFDFYRDSQILLEMNRKIDESADGSLPVNLGLVNNLGIRVSFALVPWGGNCGVGSWLDTHWKRNMQTKSRSKELKFFGDK 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1535g00001 309 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 96 218 - -
Mupr1535g00001 309 Pfam KNOX1 domain 115 154 IPR005540 GO:0003677|GO:0005634
Mupr1535g00001 309 SMART KNOX2_2 165 216 IPR005541 GO:0003677|GO:0005634
Mupr1535g00001 309 SMART KNOX1_2 114 158 IPR005540 GO:0003677|GO:0005634
Mupr1535g00001 309 Pfam KNOX2 domain 168 215 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1535g00001 Mupr-Chr1535 5098 6986 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1535g00001 116 212 Homeobox Transcription Factor Family AT1G62360 82.474 6.26e-49 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1535g00001 - - gmx:547796 344.354