Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15355g00002 CATACTATTCCTTTATCCTCCTTGCTTACTAGTACTACTTCTCTTCAGTTTCTGATTCCGAGGGCAGATCAAGCAGTTATGGAAATCCAAATTCCACTATCATTTATGTTTCTCTTTCTACTTGTTGTACCTTCCTGCATTTGCTCTTCCCCACTTGAAGATCCCGAGTTAGTGGTAGAAGAAGTACAAAAGAGCATTAATGCCTCAAGGAGGAACTTAGCATTTCTTTCTTGTGTGACGGGGAACCCTATTGACGATTGTTGGAGGTGTGACCAGAATTGGGAAAAGAACCGGAAGCGTTTGGCAGATTGTGCCATTGGGTTTGGCAAGCATGCTATTGGAGGGAGGGATGGTAAAATATATGTTGTGAGTGACCCTGGTGACGACCCTGTGAAGCCCAAGCCTGGTACATTGAGATATGGTGTCATCCAAGAGGAGCCATTGTGGATCATATTTAAGCGCGACATGGTGATAAAGCTTAAGCAAGAGCTTATGATGAACTCTTTCAAGACTATTGACGGTAGAGGAGCTAGTGTGCACATTGCTGGTGGACCTTGCATTACTATACAGTATGTGAGCAATGTTATTATTCATGGGATTAACATCCATGATTGTAAACAAGGAGGGAATGCCTATGTGAGAGACTCCCCTACACATTATGGGTGGAGGACTCTCTCGGACGGTGATGGGGTCTCAATCTTTGGTGGGAGCCATGTTTGGGTGGACCACTGCTCTCTCTCCAATTGTCGTGATGGCCTAATTGATGCCATCCATGGTTCCACCGCCATCACCATATCCAACAACTACATGACCCATCATAACAAGGTCATGCTTTTGGGCCACAGTGATACTTTCACCCGGGACAAGAACATGCAAGTCACCATTGCCTTTAACCATTTTGGAGAAGGGCTAGTGCAGAGAATGCCAAGATGCAGGCATGGATACTTCCATGTGGTGAACAATGATTACACCCAATGGAGAATGTATGCCATAGGGGGCAGTGCTGCCCCAACTATCAATAGCCAAGGCAATAGATTTCTTGCTCCCAATGACAATACCTTCAAAGAGGTGACGAAGAGGGAGAATACTCCAGAGAGCAAGTGGAAGAGTTGGAATTGGAGGTCAACAGGTGATATGATGTTAAACGGTGCGTTTTTCAGGGCATCAGGAGGAGGTGCATCTTCAAGCTATGCTCGAGCATCCAGTTTGGCAGCAAAACCATCTTCCGTTGTCAGTTCCATCACTGCATCAGCTGGATCACTTCTATGCAGAAAGGATCCTGAATTTGTGGTCCAGGAAGTGCAAAAGAGCATTAATGGATCCTTAAGGAGAAAGTTGGGGTATCTATCTTGTGGGACGGGGAACCCCATTGATGATTGTTGGAGGTGCGACCCGAAGTGGGAAAGGAATCGGAAGCGTCTAGCAAGTTGTGGAATTGGGTTTGGGAAGCACGCCATTGGTGGAAAATATGGGAAAGTGTATGTGGTGAGTGACCCTAGCGATGAGCCTGTGAAACCGAAACCAGGCACTTTGAGACACGCCGTTATCCAACATGACCCTTTGTGGATAATTTTCAAGCATGACATGGTCATCAAGCTCCGCATGGATCTCCTTGTTAACTCTTACAAAACCATTGATGGAAGAGGAGCAAATGTCCACCTTGCTGGAGGGCCTTGCATTAAGGTGCACAACAAGACCAATATCATTATTCATGGCTTACACATCCATCATTGCAAACGAGGTGGTGGCTCTCTTAGATCTGACGGTGATGGGATCACCATCTTTGCTGGGACCCATGTTTGGGTAGATCATTGCACCTTGTCAAATTGTTTTGATGGCCTTATTGATGTTGTTCATGGTTCAACGGCTATCACCATTTCTAACAATTACATGACTCACCATAACAAAGTCATGCTCTTGGGTCACAGTGATTCCTACAAGGATGACAAGAATATGCAAGTCACCATAGCCTTCAACCGTTTTGGAGAAGGGCTTGGGGGAAGAATGCCGAGGTGCAGGTTCGGATACTTCCATGTGGTGAACAACGATTACACACATTGGCAACAATACGCAATAGGTGGGAGTTCATCCCCAACTATTTTCAGCCAAGGGAATAGATTTATTGCTTCAAATGATGAAGACCACAAAGAGGTGACAAAACATTTTGGATCATCAGAGAGAGAGTGGAGGAAATGGAATTGGAGGTCAGAAGGAGATCTAATGTTAAATGGGGCATATTTTACAGCGTCGGGGGGTAGAGGAGCTGCTAGGTATGATAAAGCGTCAAGCATGGGAGCACGACCACCTATGCTTGTGCCTTCCATCACAGCAGGGGCTGGAGCCCTTTCATGCAAAAACACCAACTTATGCCACTAG 2376 0.4579 HTIPLSSLLTSTTSLQFLIPRADQAVMEIQIPLSFMFLFLLVVPSCICSSPLEDPELVVEEVQKSINASRRNLAFLSCVTGNPIDDCWRCDQNWEKNRKRLADCAIGFGKHAIGGRDGKIYVVSDPGDDPVKPKPGTLRYGVIQEEPLWIIFKRDMVIKLKQELMMNSFKTIDGRGASVHIAGGPCITIQYVSNVIIHGINIHDCKQGGNAYVRDSPTHYGWRTLSDGDGVSIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAITISNNYMTHHNKVMLLGHSDTFTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTQWRMYAIGGSAAPTINSQGNRFLAPNDNTFKEVTKRENTPESKWKSWNWRSTGDMMLNGAFFRASGGGASSSYARASSLAAKPSSVVSSITASAGSLLCRKDPEFVVQEVQKSINGSLRRKLGYLSCGTGNPIDDCWRCDPKWERNRKRLASCGIGFGKHAIGGKYGKVYVVSDPSDEPVKPKPGTLRHAVIQHDPLWIIFKHDMVIKLRMDLLVNSYKTIDGRGANVHLAGGPCIKVHNKTNIIIHGLHIHHCKRGGGSLRSDGDGITIFAGTHVWVDHCTLSNCFDGLIDVVHGSTAITISNNYMTHHNKVMLLGHSDSYKDDKNMQVTIAFNRFGEGLGGRMPRCRFGYFHVVNNDYTHWQQYAIGGSSSPTIFSQGNRFIASNDEDHKEVTKHFGSSEREWRKWNWRSEGDLMLNGAYFTASGGRGAARYDKASSMGARPPMLVPSITAGAGALSCKNTNLCH 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15355g00002 791 SUPERFAMILY Pectin lyase-like 66 424 IPR011050 -
Mupr15355g00002 791 SMART pbh1 597 628 IPR006626 -
Mupr15355g00002 791 SMART pbh1 192 235 IPR006626 -
Mupr15355g00002 791 SMART pbh1 236 267 IPR006626 -
Mupr15355g00002 791 SMART pbh1 565 596 IPR006626 -
Mupr15355g00002 791 PANTHER PECTATE LYASE 18-RELATED 55 425 IPR045032 GO:0030570
Mupr15355g00002 791 FunFam Pectate lyase 81 422 - -
Mupr15355g00002 791 SMART amb_all 528 713 IPR002022 -
Mupr15355g00002 791 SMART amb_all 155 352 IPR002022 -
Mupr15355g00002 791 Pfam Pectate lyase 536 707 IPR002022 -
Mupr15355g00002 791 Pfam Pectate lyase 161 346 IPR002022 -
Mupr15355g00002 791 Gene3D - 454 783 IPR012334 -
Mupr15355g00002 791 Gene3D - 81 422 IPR012334 -
Mupr15355g00002 791 SUPERFAMILY Pectin lyase-like 455 781 IPR011050 -
Mupr15355g00002 791 PRINTS Pollen allergen Amb family signature 104 121 IPR018082 -
Mupr15355g00002 791 PRINTS Pollen allergen Amb family signature 127 152 IPR018082 -
Mupr15355g00002 791 PRINTS Pollen allergen Amb family signature 307 326 IPR018082 -
Mupr15355g00002 791 PRINTS Pollen allergen Amb family signature 227 248 IPR018082 -
Mupr15355g00002 791 PRINTS Pollen allergen Amb family signature 371 395 IPR018082 -
Mupr15355g00002 791 PRINTS Pollen allergen Amb family signature 400 423 IPR018082 -
Mupr15355g00002 791 PRINTS Pollen allergen Amb family signature 329 348 IPR018082 -
Mupr15355g00002 791 PRINTS Pollen allergen Amb family signature 163 179 IPR018082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15355g00002 Mupr-Chr15355 8936 17320 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15355g00002 414 790 Polysaccharide Lyase AT5G63180 65.649 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15355g00002 K01728 - gmx:100782388 740.725