Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15350g00001 ATGGTTGTGCAAAACAGGAACTTATCTTCAAGTGGATTGTCAGGAAAGATAGACCCTTCAATCTCAAAGCTCACCATGTTGGAGAACTTGGATTTATCAAACAATAGCTTAAACGGTGAAGTTCCTGATTTTCTGTCTCAATTACAGCACTTGAAGATCTTAAACTTGGAGAAGAATAACCTCTCCGGTTCAATTCCCTCCGCACTTGTTCAACAATCTAAGCAAGGTTCTCTCTCACTAAGTGTGGACCAAAATCCATATCTACGTAAATCTGATCAAGGCAACGAGAACAAAGAAAACAATATTATGGCCGTAATAGCATCACTTGGCGTTTTGATTCTTCTGGTGGCCTTGGCAGCTATATTGTGCACCCTTAAAAGGAGAAAATCGAAAGCTTGGATGGTAGAAAAGGATCAAAGTCAGATGTCACTGAAATACGAAAAACAAGATGATTCATTACTGGAATGTAAAAAACAAATATATTCACACTCTGAGGTCCTTAAAATGACCAACAATTTAAATACAACTGTTGGTAAAGGAGGATTCGGAACAGTTTATCTGGGCTATATTGATGACATTCCAGTTGCAGTGAAAATGCTTTTCCCTTCGGATTTTCATGGTTATCAACAATTTCTAGCAGAGGTTAAACTTCTAATGAGAGTTCATCATAAAAATTTGACTTCCCTTATTGGTTATTGTAATGAAGGAACCAATAAGAGTCTCATATATGAGTACATGGCTAATGGAAACTTACAAGAACATCTCTCTGGTAAACACAGCAAATCAAAATTCTTGAGCTGGGAAGACAGAATTCGTATAGCAGTGGATGCAGCCTTAGGATTGGAGTATCTGCAAAATGGTTGCACGCCACCTATAATCCACAGAGACGTAAAATCTACAAACATCTTGTTGGATGAACACTTCCAAGCAAAAATATCTGATTTTGGTCTATCCAAAATTGTCCCAACTGATGGGGTTTCTCATGTGTCAACTGTTGTTGCTGGTACTCTTGGTTATCTGGACCCTCACTACTACATATCCAATAGATTAACAGAGAAAAGTGATGTTTATAGCTTCGGAGTTGTTCTTTTGGAAATAATCACAAGTCAACCAGTAATAGCAAAGGATGAAGAAAAGACTCACATAATTCAAAGGGTTAGATCCCTGCTTGAGAAAGGGGATATCAAGGGAATTGTTGACTCAAAGTTAGAAGGGGATTTTGACATTAACTCAGCTTGGAAAGTTGTAGAAACAGCATTGACTTGTGTTTCTCTAAATCCCAACGAAAGGCCAACCATGAGTGTCGTAGTGTCTGAACTAAAGGAGACTTTAGCAACCGAAATAGCTCGAACAAAACATAAAAGTGGTGCCGATCCCAGATATTCAGTTGATCTGGTCAGCGTGAATCTGAACACGGAATTGATGCCCCTGGCTAGGTAA 1440 0.3861 MVVQNRNLSSSGLSGKIDPSISKLTMLENLDLSNNSLNGEVPDFLSQLQHLKILNLEKNNLSGSIPSALVQQSKQGSLSLSVDQNPYLRKSDQGNENKENNIMAVIASLGVLILLVALAAILCTLKRRKSKAWMVEKDQSQMSLKYEKQDDSLLECKKQIYSHSEVLKMTNNLNTTVGKGGFGTVYLGYIDDIPVAVKMLFPSDFHGYQQFLAEVKLLMRVHHKNLTSLIGYCNEGTNKSLIYEYMANGNLQEHLSGKHSKSKFLSWEDRIRIAVDAALGLEYLQNGCTPPIIHRDVKSTNILLDEHFQAKISDFGLSKIVPTDGVSHVSTVVAGTLGYLDPHYYISNRLTEKSDVYSFGVVLLEIITSQPVIAKDEEKTHIIQRVRSLLEKGDIKGIVDSKLEGDFDINSAWKVVETALTCVSLNPNERPTMSVVVSELKETLATEIARTKHKSGADPRYSVDLVSVNLNTELMPLAR 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15350g00001 479 Pfam Protein tyrosine and serine/threonine kinase 173 440 IPR001245 GO:0004672|GO:0006468
Mupr15350g00001 479 Gene3D Transferase(Phosphotransferase) domain 1 247 463 - -
Mupr15350g00001 479 SUPERFAMILY Protein kinase-like (PK-like) 156 440 IPR011009 -
Mupr15350g00001 479 SMART serkin_6 171 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr15350g00001 479 ProSiteProfiles Protein kinase domain profile. 171 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr15350g00001 479 PRINTS Leucine-rich repeat signature 27 40 - -
Mupr15350g00001 479 PRINTS Leucine-rich repeat signature 48 61 - -
Mupr15350g00001 479 ProSitePatterns Protein kinases ATP-binding region signature. 177 198 IPR017441 GO:0005524
Mupr15350g00001 479 Gene3D Ribonuclease Inhibitor 2 86 IPR032675 -
Mupr15350g00001 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 292 304 IPR008271 GO:0004672|GO:0006468
Mupr15350g00001 479 Gene3D Phosphorylase Kinase; domain 1 177 246 - -
Mupr15350g00001 479 PANTHER OS07G0107800 PROTEIN-RELATED 6 444 - -
Mupr15350g00001 479 SUPERFAMILY L domain-like 7 81 - -
Mupr15350g00001 479 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 246 453 - -
Mupr15350g00001 479 CDD STKc_IRAK 177 442 - -
Mupr15350g00001 479 FunFam Leucine-rich repeat receptor-like kinase 2 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15350g00001 Mupr-Chr15350 2875 5764 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15350g00001 7 479 Receptor kinase-like Gene Family AT1G51800 50.104 6.20e-152 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mupr15350g00001 PK_Tyr_Ser-Thr 1.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15350g00001 - - vun:114185309 689.878