Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15338g00001 ATGTGTTCATACGTTAGGTCATGGATACAAGAGCCACCCCTCTTTGTTAATTTCTTCTCAAGAGATAGCTGTGAAAGTATCGGCGGTCTGACTCAGTCCAAATCAGAGAAAGCCTCCGAAGCAGATCTTCTCTTTGTTTACAACTCTTTTTTCTTCTTCTCCTCCTTATTGTTATTCTTTTCTTCAAAGAAGACACTCTTAACAGCAATTCTGGCTAATCCTTGGTGGACCGGTCATCAGGTGGGGTTGGGTGCAGGGGTTGATCCTGCAACCAATTCTCCTTCTTCCGCCTTAAACAAACTCAACATGGATCTTTCCATCAACGAGAGAAGCGCTGCTAGAGAAACACAAGACGAAGAAGATGAAAGAGACAACGGTGATGAACCCAAAGAGGGTGCAGTTGAGGTTGGAAATCGCAGGCCCAGAGGGAGGCCACCGGGCTCCAAAAACAAGCCCAAACCCCCCATCTTCGTCACCAGGGACAGCCCAAACTCCCTCAGAAGCCATGTCATGGAGGTTGCGGGCGGCGCCGACGTGGCAGAAAGTGTGGCCCAGTTCGCACGGAGGCGCCAGCGTGGGGTGTGTGTCCTCAGTGGGAGCGGTTCCGTCGCCAACGTTACTCTCCGGCAACCTGCTGCGCCAGGAGCCGTCGTCGCGCTTCATGGAAGGTTTGAGATTTTGTCCCTCACTGGGGCGTTTCTTCCTGGCCCTGCTCCGCCGGGAGCTACTGGACTTACTGTATATCTCGCCGGAGGACAGGGCCAAGTTGTAGGAGGGAGCGTTGTCGGCTCCCTCGTGGCAGCTGGACCAGTTATGGTGATTGCTGCCACTTTTGCTAATGCTACTTATGAGAGGTTGCCGCTTGAGGAGGAAGAAGATGACGGTGGTGGTAGTGTGCAAGGAGGGAGTACCCTAGGAGGATCTCCTCCTGGAATTGGTAGCAGTGGCGGTGGTGGTAATAATAGTGGACCCCACTTGCAAGGTGGGATTCCTGATCCTTCTACTTTGCCTTTGTATAATCTTCCACCGAATCTTCTCCCCAATGGAGGCCAAGTGGGGCATGAGGCTTTTGCTTGGGCTCATGGCCATGGAAGACCACCTTACTGA 1107 0.5276 MCSYVRSWIQEPPLFVNFFSRDSCESIGGLTQSKSEKASEADLLFVYNSFFFFSSLLLFFSSKKTLLTAILANPWWTGHQVGLGAGVDPATNSPSSALNKLNMDLSINERSAARETQDEEDERDNGDEPKEGAVEVGNRRPRGRPPGSKNKPKPPIFVTRDSPNSLRSHVMEVAGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLTGAFLPGPAPPGATGLTVYLAGGQGQVVGGSVVGSLVAAGPVMVIAATFANATYERLPLEEEEDDGGGSVQGGSTLGGSPPGIGSSGGGGNNSGPHLQGGIPDPSTLPLYNLPPNLLPNGGQVGHEAFAWAHGHGRPPY 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15338g00001 368 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 110 362 IPR014476 GO:0003680
Mupr15338g00001 368 Gene3D - 166 293 - -
Mupr15338g00001 368 MobiDBLite consensus disorder prediction 111 164 - -
Mupr15338g00001 368 FunFam AT-hook motif nuclear-localized protein 166 293 - -
Mupr15338g00001 368 CDD DUF296 167 250 IPR005175 -
Mupr15338g00001 368 Pfam Plants and Prokaryotes Conserved (PCC) domain 167 279 IPR005175 -
Mupr15338g00001 368 MobiDBLite consensus disorder prediction 301 322 - -
Mupr15338g00001 368 MobiDBLite consensus disorder prediction 289 336 - -
Mupr15338g00001 368 SUPERFAMILY AF0104/ALDC/Ptd012-like 163 291 - -
Mupr15338g00001 368 ProSiteProfiles PPC domain profile profile. 163 302 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15338g00001 Mupr-Chr15338 1370 2672 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15338g00001 71 368 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 61.489 1.17e-104 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15338g00001 - - gmx:102663643 357.066