Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15334g00001 ATGCTGGCGGTGTCACCTTTGAGGAGCACAAGAGATGAAGGGCAAGGGGAGATGGAGAGTTTCTCTATTGGAACCGATGACTTCGCTGACCTTTCAGAAGGGAACTTGCTTGAAAGCATCAACTTCGATGATCTCTTCATGGGAATTGATGATGAAGAAGATGTCTTGCCGGATCTGGAGATGGACCCTGAAATGCTTGCTGAGTTCTCCCTCAGTGAGGAATCGGAGATAGCCTCAGTGGCAAATAACAAATCCGATGGGAATATAGTAATTGCTACGAAAAAACAAGATGAGGTTATAGCAGCCAATTCTTCTTCAGATTCGGGGTCAAGTCAAGGGGAGGAGATAGTAAGCAACAGTGATGAATCAGTGGTGGTAAATCCATCCCCTAAGGAAAGCGAGAAAGGAAGAAAATCATCAACAGCTCACTCAAGGAATAATAATCCTCAAGGGAAGAGAAAGGTGAAGGTGGATTGGACCCCAGAATTGCACAGGCGATTCGTGCAAGCAGTGGAACAGCTAGGAGTGGATAAGGCGGTGCCTTCAAGGATTTTGGAGATTATGGGAATTGACTGCCTCACCCGCCATAACATTGCCAGCCACCTTCAAAAATATCGATCGCATAGGAAGCATTTGCTAGCGCGTGAAGCTGAAGCAGCAAGGTGGAGTCAACGGAAGCAATTGTTGGGTGCAGCAGGTGTAGGTAGAGGAGGCAAGAGAGAAGTGAACCCTTGGCTTGCACCAACCATGGGTTTCCCTCCCATCACACCAATGCACCATTTTAGACCTTTACATGTATGGGGGCATCACACCTTGGATCACTCCTTCATGCACATGTGGCCTAAACATCTGCCTTATTCGCCGTCCCCACCAGCATGGCCGCCACGGACTGCTCCATCTCCGCCGCCACCGGACCCTTTATATCGGCACCAACATCATAGGGCATATTCTTGTTTGGCACAGGCTCCAAACGCACCAACCCCAGGAACACCGTGTTTTCCACAGCCTCTGACAACCACGTTTGTTCACTCACACAATGATAACACGCAGAGATTTGGCTCTTCAACTGTTCCGGGCATCCCACAACATCATGCAATGTACCAAATTGTAGATCCAGGAATTGGCATCCCGGCCACCCAACCACCACCTCGCCCCCTCCTCGACTTTCATCCGTCAAAGGAGAGCATAGATGCGGCTATTAGTGATGCTTTATCAAAACCATGGTTACCACTACCTCTTGGCCTTAAAGCTCCAGCACTTGATGGTGTAATGGGTGAATTACAAAGACAAGGGATTCCTAAAATCCCTCCCTCTTGCGCTTGA 1323 0.4883 MLAVSPLRSTRDEGQGEMESFSIGTDDFADLSEGNLLESINFDDLFMGIDDEEDVLPDLEMDPEMLAEFSLSEESEIASVANNKSDGNIVIATKKQDEVIAANSSSDSGSSQGEEIVSNSDESVVVNPSPKESEKGRKSSTAHSRNNNPQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAARWSQRKQLLGAAGVGRGGKREVNPWLAPTMGFPPITPMHHFRPLHVWGHHTLDHSFMHMWPKHLPYSPSPPAWPPRTAPSPPPPDPLYRHQHHRAYSCLAQAPNAPTPGTPCFPQPLTTTFVHSHNDNTQRFGSSTVPGIPQHHAMYQIVDPGIGIPATQPPPRPLLDFHPSKESIDAAISDALSKPWLPLPLGLKAPALDGVMGELQRQGIPKIPPSCA 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15334g00001 440 MobiDBLite consensus disorder prediction 101 127 - -
Mupr15334g00001 440 Pfam Myb-like DNA-binding domain 157 206 IPR001005 -
Mupr15334g00001 440 SUPERFAMILY Homeodomain-like 152 211 IPR009057 -
Mupr15334g00001 440 NCBIfam myb-like DNA-binding domain, SHAQKYF class 154 208 IPR006447 GO:0003677
Mupr15334g00001 440 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 151 210 IPR017930 -
Mupr15334g00001 440 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 439 IPR044825 GO:0003700|GO:0045893
Mupr15334g00001 440 FunFam Two-component response regulator 150 213 - -
Mupr15334g00001 440 MobiDBLite consensus disorder prediction 101 156 - -
Mupr15334g00001 440 MobiDBLite consensus disorder prediction 1 25 - -
Mupr15334g00001 440 Gene3D - 151 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15334g00001 Mupr-Chr15334 1702 5611 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15334g00001 27 289 G2-like Transcription Factor Family AT5G44190 47.191 5.21e-60 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mupr15334g00001 Myb_DNA-binding 5.7e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15334g00001 - - gmx:100790591 680.248