Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15333g00001 ATGGAGTTGATGCAACAAGTTAAAGGTAATTATTCTGATAGCAGGGAGGAAGAGGAGGAAGAGGAAGCAACAGAGATTATTACAATCACGAGAGAAGCAGAAAGCAGCAATGCCACTAACAATTCACTCACTGTATATGGATTAGGGTTACACCAGCAAGATGCATCATCCAATTTCGGAAAGCAGCTAGACTTGATGGAGTTGTCACTGGGGAGCAACAAGGAAGAGGAAGAAGAAAGGAATTTGCAACAAGGAGGAGGAGGAGGAATTGTTCATAATCATCAACATGAACACGAACATCACCATCATCATGATGGCACTTGTTCAAACACGAAGGAAGTGGTGGAGAAAGAGCACATGTTTGACAAAGTGGTGACACCGAGCGATGTAGGAAAGCTGAACAGGCTGGTGATACCGAAGCAGCACGCAGAGAAGTATTTCCCCCTTGACTCCACATCGAATGAGAAGGGTCTGCTTCTCAATTTCGAAGATCGAAACGGGAAGGTGTGGCGGTTCAGGTACTCCTATTGGAACAGCAGCCAAAGCTATGTGATGACAAAGGGGTGGAGCCGTTTCGTGAAGGAGAAGAAGCTCGATGCCGGCGACATTGTGTCCTTCCAGCGTGGCCTCGGAGATTTGAATAGACATAGGTTGTACATAGATTGGAGGAGAAGGTCCGATCATGCTCATGTTCATGCCCCTGATCCTTCAACCTCTCCCTTCTTTCTTCCTTCCATCAGATGGTACTCACTTCCTCCCACCATGCCACCTCGCTACCACGATCACTTTCAACATCCCAATTACAACAACTTGTTCACTTTTCAGCAACAGCAGTACCTTGGTGCTGCAACTGCCACTGCTGGTGCTGCTCATCATCACATTCATAACAACTACGCTGAGCAGAATTCAGGATCTGGGTCACTCTATTACCTAAGGTCCTCCATGTCATCAATGCCTGGTGCTGGTGATCAAAACTTGCAAGGGAGAGGGAACAACATTGTTCCCATGATCATTGATTCTGTGCCGGTTAACGTTGCTCATCATCGCCATGGGAATGGGGGCATGACCAGTGCTGGTGCTCGTGGTGCTACAACTACTAGTGGTGGAAAACGACTGAGGCTATTTGGGGTGAACATGGAATGTGCCTCTTCGGCAGAAGATTCCAAAGGGTTGTCCTCGGGTTCGGCAGCACATTTGACAGTGGGTAATTCGCTTGCCTCCTCCTCCTCTTCTTCTTCTTCTTCTCTTCAGCGCTTGAGGATGTCCCATGAAGACCCACTTTCGTCGTCAGCAAGGTTTGGGGATCACAAAGGGGGGACTTCGGTGCTCTTTGACTTGGATCCCTCTTTGCAGTATCGCCAGTGA 1365 0.4821 MELMQQVKGNYSDSREEEEEEEATEIITITREAESSNATNNSLTVYGLGLHQQDASSNFGKQLDLMELSLGSNKEEEEERNLQQGGGGGIVHNHQHEHEHHHHHDGTCSNTKEVVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSTSNEKGLLLNFEDRNGKVWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGLGDLNRHRLYIDWRRRSDHAHVHAPDPSTSPFFLPSIRWYSLPPTMPPRYHDHFQHPNYNNLFTFQQQQYLGAATATAGAAHHHIHNNYAEQNSGSGSLYYLRSSMSSMPGAGDQNLQGRGNNIVPMIIDSVPVNVAHHRHGNGGMTSAGARGATTTSGGKRLRLFGVNMECASSAEDSKGLSSGSAAHLTVGNSLASSSSSSSSSLQRLRMSHEDPLSSSARFGDHKGGTSVLFDLDPSLQYRQ 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15333g00001 454 FunFam B3 domain-containing protein 114 234 - -
Mupr15333g00001 454 MobiDBLite consensus disorder prediction 403 424 - -
Mupr15333g00001 454 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 18 402 IPR044800 GO:0003700
Mupr15333g00001 454 MobiDBLite consensus disorder prediction 403 454 - -
Mupr15333g00001 454 SMART B3_2 121 226 IPR003340 GO:0003677
Mupr15333g00001 454 MobiDBLite consensus disorder prediction 1 24 - -
Mupr15333g00001 454 Gene3D - 114 234 IPR015300 -
Mupr15333g00001 454 SUPERFAMILY DNA-binding pseudobarrel domain 118 224 IPR015300 -
Mupr15333g00001 454 Pfam B3 DNA binding domain 121 225 IPR003340 GO:0003677
Mupr15333g00001 454 ProSiteProfiles B3 DNA-binding domain profile. 121 226 IPR003340 GO:0003677
Mupr15333g00001 454 MobiDBLite consensus disorder prediction 92 108 - -
Mupr15333g00001 454 MobiDBLite consensus disorder prediction 72 108 - -
Mupr15333g00001 454 CDD B3_DNA 119 208 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15333g00001 Mupr-Chr15333 2698 4232 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15333g00001 65 447 RAV Transcription Factor Family AT2G46870 44.133 7.61e-78 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mupr15333g00001 B3 2e-29 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15333g00001 K09287 - gmx:100812161 573.933