Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1532g00008 ATGTACGTGCAGAGGATTTCAGCGCTGGATAGAACTCGGAAGCTCCAGGTTCGGGCAACAATCATAATGGCATTGTGTAATAAGTTTGGAAATGTCTTGAGGCAGGGTGCTGCTCACAGCAGACAAGCACCTGTTGCATCCATCCTTAATTATATTCGCTGCATGTCTTCAAGCAAGCTTTTCATAGGAGGCCTTTCATATGGAGTTGATGACCAGTCTCTTAAGGACGCATTTGCTAGCTTTGGAGATGTGGTTGAGGCAAGAGTTATCACTGATAGAGACACTGGAAGATCAAGGGGATTTGGATTTGTCAACTTCTCCAGTGATGAGTCTGCAACCTCGGCCCTCTCCGCAATGGATGGGCAGGATCTAAATGGACGAAACATTCGAGTATCCTATGCAAATGATAGACCTTCTGGACCCCGATCTGGTGGCGGTGGTTACGGTGGTAGTGGTGGTGGTTTTGGTTCTCGTAATGGTGGTTGTCTATTTGAACTTTAA 501 0.4651 MYVQRISALDRTRKLQVRATIIMALCNKFGNVLRQGAAHSRQAPVASILNYIRCMSSSKLFIGGLSYGVDDQSLKDAFASFGDVVEARVITDRDTGRSRGFGFVNFSSDESATSALSAMDGQDLNGRNIRVSYANDRPSGPRSGGGGYGGSGGGFGSRNGGCLFEL 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1532g00008 166 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 33 158 - -
Mupr1532g00008 166 MobiDBLite consensus disorder prediction 132 152 - -
Mupr1532g00008 166 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 58 136 IPR000504 GO:0003723
Mupr1532g00008 166 FunFam Glycine-rich RNA-binding protein 2 47 163 - -
Mupr1532g00008 166 SUPERFAMILY RNA-binding domain, RBD 54 161 IPR035979 GO:0003676
Mupr1532g00008 166 SMART rrm1_1 59 132 IPR000504 GO:0003723
Mupr1532g00008 166 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 60 130 IPR000504 GO:0003723
Mupr1532g00008 166 CDD RRM2_NsCP33_like 59 134 - -
Mupr1532g00008 166 Gene3D - 52 163 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1532g00008 Mupr-Chr1532 58288 60714 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1532g00008 57 146 Eukaryotic Initiation Factors Gene Family AT4G34110 41.111 9.15e-15 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1532g00008 - - gmx:100499841 201.06