Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15319g00001 ATGGCTGGATTGGATTTAGGCACGGCTTCACGCTTCGTTCAAAGTCTCCACAGACACGAATCCGAGGAAGACGCGAAACAACCAGACCAATTCCCCGCCGAAGATGGGCCCCACCACGACGGCGTCGGCCGCCGACCGCGCGGCCGTCCGCCGGGGTCCAAGAACAAGCCGAAGCCGCCGGTGATCATAACGAGGGAGAGCGCGAACACTCTCCGCGCTCACATCCTCGAAGTCGGCAACGGCTGCGACGTGTTCGACAGCGTGGCCACCTACGCGCGGCGGCGCCAGCGCGGGATCTGTATTCTGAGCGGCAGCGGCACCGTGACAAATGTGAGCTTGCGGCAGCCTGCGTCGGCGGGAGCGGTGGTCACACTTCACGGCAGGTTCGAGATACTGTCGCTGGCGGGATCTTTCCTGCCGCCGCCGGCTCCGCCGGGGGCCACGAGCCTGAGCATATACCTTGCCGGAGGGCAGGGGCAAGTGGTGGGTGGGAGCGTGGTGGGGGAGTTGACCGCGGCGGGGCCGGTGATTGTCATCGCCGCGTCGTTCACCAACGTGGCGTATGAGCGGTTACCTTTGGAAGAAGAAGAACAGGTTCAGATATCTGGTGGTGGTGCCGTGGGAAACAACAACAATAATAATAGTAATAACCCTTTCTCTGACCCTTCCTCGGCACTTCCTTTCTTTAATTTGCCCATGAATGTTCACTTACCCTCACCAACTAATGAAGATGTTCATCGCAAGTTGGATAAGGTAGCTAGGTTTCCGGCGCTCAGGACTTAA 783 0.5964 MAGLDLGTASRFVQSLHRHESEEDAKQPDQFPAEDGPHHDGVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVGNGCDVFDSVATYARRRQRGICILSGSGTVTNVSLRQPASAGAVVTLHGRFEILSLAGSFLPPPAPPGATSLSIYLAGGQGQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPLEEEEQVQISGGGAVGNNNNNNSNNPFSDPSSALPFFNLPMNVHLPSPTNEDVHRKLDKVARFPALRT 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15319g00001 260 MobiDBLite consensus disorder prediction 15 47 - -
Mupr15319g00001 260 MobiDBLite consensus disorder prediction 199 223 - -
Mupr15319g00001 260 MobiDBLite consensus disorder prediction 1 61 - -
Mupr15319g00001 260 MobiDBLite consensus disorder prediction 203 223 - -
Mupr15319g00001 260 ProSiteProfiles PPC domain profile profile. 68 204 IPR005175 -
Mupr15319g00001 260 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 20 206 IPR014476 GO:0003680
Mupr15319g00001 260 Gene3D - 71 203 - -
Mupr15319g00001 260 FunFam AT-hook motif nuclear-localized protein 71 198 - -
Mupr15319g00001 260 Pfam Plants and Prokaryotes Conserved (PCC) domain 72 185 IPR005175 -
Mupr15319g00001 260 CDD DUF296 72 155 IPR005175 -
Mupr15319g00001 260 SUPERFAMILY AF0104/ALDC/Ptd012-like 68 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15319g00001 Mupr-Chr15319 4646 7262 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15319g00001 1 235 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 56.786 6.02e-88 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15319g00001 - - gmx:100818680 335.109