Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1530g00004 ATGCCTGCTGGTCACGGTTTGAGATCTCGCACGAGAGACTCCTTCTCTCGTCCCTTCAGGAAGAAGGGTACCATCGCCCTCACCACCTACCTCAGGACCTACCGCATCGGCGACTACGTCGACGTCAGGGTCAACGGCGCTGTCCATAAGGGTATGCCTCACAAGTTCTACCATGGCCGCACCGGACGTGTCTGGAACGTTACCAAGCGCGCAATTGGCGTCGAGGTCAACAAACAGGTCGGAAATAGAATTATCAGAAAGAGAATTCATGTGCGAGTGGAGCATGTGATGCCTTCACGCTGCACTGAGGAATTTCGCCTTAGGAAGATCAAGAATGATCAACTGAAGAATGATGCTAAGCAGGCTGGTAAGGTTATTAGCACCAAGAGACAGCCTGAGGGTCCCAAACCGGGTTTCATGGTGGAAGGTGCTACATTGGAGACCGTCACCCCCATTCCTTATGATGTTGTCAATGATCTTAAAGGGGGTAAGCGCGTATTTGGTTTTGTTGATATAGAAGCTGTGGTGAATGGGAGTGTGGATGTGAGCATGTCTAGGTAG 561 0.5098 MPAGHGLRSRTRDSFSRPFRKKGTIALTTYLRTYRIGDYVDVRVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVMPSRCTEEFRLRKIKNDQLKNDAKQAGKVISTKRQPEGPKPGFMVEGATLETVTPIPYDVVNDLKGGKRVFGFVDIEAVVNGSVDVSMSR 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1530g00004 186 PANTHER 60S RIBOSOMAL PROTEIN L21 1 163 IPR001147 GO:0003735|GO:0005840|GO:0006412
Mupr1530g00004 186 FunFam 60S ribosomal protein L21 1 98 - -
Mupr1530g00004 186 Gene3D Ribosomal protein L21 1 97 IPR036948 GO:0003735|GO:0005840|GO:0006412
Mupr1530g00004 186 FunFam 60S ribosomal protein L21 99 158 - -
Mupr1530g00004 186 SUPERFAMILY Translation proteins SH3-like domain 3 99 IPR008991 -
Mupr1530g00004 186 Pfam Ribosomal protein L21e 1 101 IPR001147 GO:0003735|GO:0005840|GO:0006412
Mupr1530g00004 186 ProSitePatterns Ribosomal protein L21e signature. 37 62 IPR018259 GO:0003735|GO:0005840|GO:0006412
Mupr1530g00004 186 Gene3D - 99 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1530g00004 Mupr-Chr1530 42774 43837 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1530g00004 1 163 Cytoplasmic Ribosomal Protein Gene Family AT1G09690 82.209 9.12e-102 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1530g00004 K02889 - gmx:100305629 318.546