Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15308g00001 ATGAGAATCAAGTATTTAAAGGCAGTGCTCAGACAAGATGTAGCATACTTTGATTTGCATGAGACAAGCACGTCCGAGGTCATCACCTGTGTGTCTAGTGACAGCCTCGTCCGTTGGGAGCTACATGTGGGTTTTGCTTTGTTCTGGAGATTGACAATTGTGAGGTTCCCCTTTGTGGTTCTTCTCGTGATCCCTCGTTTAATTTATGGGAAGACTATGATGGGGTTGGCTAGAAAGATTAGAGAAGAGAGTAATAAAGCTGGTACAATAGCAGAACAAGCAATATCTTCTATCAGAACTGTTTATTCCTTTGTGGGGGAAAGCAAAACCATAGATGCTTTCTCTGATGCTCTAAAAGGCCGTTGGAAGCAATGGTGTTGTGTTTGCTATATGGGCCTTCATGTGCTATTATGGAAGATTGGTCATCCATCTACCATGGTGCTAAGGCAGGGACTGGCATTAGGTGCTAGTTTATCTGATTTGAAGTACTTCACAGAAGCATGTGCTGCTGGTGAACGGATAATGGAAATGATAAAAAGAGTTCCCAAGATTGATTCTGAAAATATGGCTGGGGAGATTCTAGAGAAGATTCCAGCAGGGAAAACAGTGGCATTGGTTGGAGGGAGTGGCTCAGGAAAATCCACTGTGATGTCACTTTTGCAAAGATTTTATGACCCAATTGAGGGAGAGATACATCATATGCAAAGATTTTATGACCCAATTGAGGGAGAGATACATCTTGATGATGTAGCTATTCATAGGTTGCTACTCAAGTGGTTGAGATCTCAAGTGGGTTTGGTGAGCCAAGATCCTACTCTGTTTGCAACTAGCATTAAGGAGAACATACTTTTTGGAAGAGATTTTTGA 867 0.4198 MRIKYLKAVLRQDVAYFDLHETSTSEVITCVSSDSLVRWELHVGFALFWRLTIVRFPFVVLLVIPRLIYGKTMMGLARKIREESNKAGTIAEQAISSIRTVYSFVGESKTIDAFSDALKGRWKQWCCVCYMGLHVLLWKIGHPSTMVLRQGLALGASLSDLKYFTEACAAGERIMEMIKRVPKIDSENMAGEILEKIPAGKTVALVGGSGSGKSTVMSLLQRFYDPIEGEIHHMQRFYDPIEGEIHLDDVAIHRLLLKWLRSQVGLVSQDPTLFATSIKENILFGRDF 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15308g00001 288 Gene3D - 234 286 IPR027417 -
Mupr15308g00001 288 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 119 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr15308g00001 288 PANTHER ABC TRANSPORTER B FAMILY 233 287 IPR039421 -
Mupr15308g00001 288 Gene3D ABC transporter type 1, transmembrane domain 1 221 IPR036640 GO:0005524|GO:0016020
Mupr15308g00001 288 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 196 286 IPR027417 -
Mupr15308g00001 288 Pfam ABC transporter transmembrane region 43 120 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr15308g00001 288 SUPERFAMILY ABC transporter transmembrane region 1 182 IPR036640 GO:0005524|GO:0016020
Mupr15308g00001 288 Pfam ABC transporter 196 281 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15308g00001 Mupr-Chr15308 6522 8387 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15308g00001 1 287 Calmodulin-binding Proteins AT2G36910 25.410 7.26e-21 90.9