Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15306g00001 ATGAATGCGGAACCACCACCGGCGCTCCTCATGTCGGTTTCCTGCATCTCCGACTACGACCTCCTCTGCGCCGAGGACACCTCCGGCATCCTCTCCGGAGAGTCGCCGGAATTCTCCTCCGACCTCGATTCCTCTCCGCTGCCGCCGTCGGAGGAATATTCCATCGCCAGTTTCATCGAGCACGAGCGCAACTTCGTCCCTGGATTCGAGTACCTCTCCAGGTTCCAATCTCGCTCCCTCGACGCCAACGCCAGAGAGGAATCCGTTGCATGGATTCTCAAGGTACACGCGTATTATGGCTTCCAACCTTTGACGGCGTACCTCGCCGTCAATTATATGGATCGGTTTCTGGATTCTCGCCGGATGCCGCAAACAAATGGGTGGCCTCTGCAACTTCTATCTGTTGCATGTTTGTCTTTGGCAGCAAAGATGGAGGAACCTCTGGTTCCATCTCTCTTGGACCTTCAGATAGAAGGTGCCAAGTACATATTTGAGCCGAGAACTATTCGTAGGATGGAGCTACTTGTTCTGGGTGTCTTGGATTGGAGGCTAAGATCAGTAACCCCACTTTGCTTCCTCGCTTTCTTTGCGTGCAAAGTAGATTCAACTGGAACTTTTACCGGGTTCCTCATTTCCCGGGCTACGGAAATCGTCGTATCTAATATCCAAGAGGCTAGCTTTCTTGCTTACAGGCCATCATGCATTGCTGCCGCAGCCATAGTCTCTGCAGCTAATGAAATTCCTAATTGGTCTGTGATTAAGCCTGAGCATGCCGCGTCATGGTGCGAGGGATTAAGAAAAGAAAAAATTATAGGGTGCTACCAGTTGATGCAAGAACTTGTGATTAACAATAATCGCCGGAAGCTTCCTACTAAAGTATTGCCGCAGCTGCGAGTAACAACTCGGACCCGAATGAGGTCAAGTGTCTCATCATTCTCATCGTCGTCCTCTTCATCCTCCTTCCCCTTGTCTTGTAAGAGGAGGAAATTAAATAACTGTTTGTGGGTAGATGACAAAGGAAGCTCCGAGTGA 1032 0.5019 MNAEPPPALLMSVSCISDYDLLCAEDTSGILSGESPEFSSDLDSSPLPPSEEYSIASFIEHERNFVPGFEYLSRFQSRSLDANAREESVAWILKVHAYYGFQPLTAYLAVNYMDRFLDSRRMPQTNGWPLQLLSVACLSLAAKMEEPLVPSLLDLQIEGAKYIFEPRTIRRMELLVLGVLDWRLRSVTPLCFLAFFACKVDSTGTFTGFLISRATEIVVSNIQEASFLAYRPSCIAAAAIVSAANEIPNWSVIKPEHAASWCEGLRKEKIIGCYQLMQELVINNNRRKLPTKVLPQLRVTTRTRMRSSVSSFSSSSSSSSFPLSCKRRKLNNCLWVDDKGSSE 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15306g00001 343 SMART Cyclin_C_2 187 315 IPR004367 -
Mupr15306g00001 343 Pfam Cyclin, C-terminal domain 187 298 IPR004367 -
Mupr15306g00001 343 ProSitePatterns Cyclins signature. 85 116 IPR006671 -
Mupr15306g00001 343 PANTHER CYCLINS 58 285 IPR039361 -
Mupr15306g00001 343 SMART cyclin_7 90 178 IPR013763 -
Mupr15306g00001 343 SUPERFAMILY Cyclin-like 169 289 IPR036915 -
Mupr15306g00001 343 Gene3D - 68 185 - -
Mupr15306g00001 343 SUPERFAMILY Cyclin-like 54 184 IPR036915 -
Mupr15306g00001 343 Pfam Cyclin, N-terminal domain 56 184 IPR006671 -
Mupr15306g00001 343 Gene3D - 57 268 - -
Mupr15306g00001 343 CDD CYCLIN_AtCycD-like_rpt1 84 182 - -
Mupr15306g00001 343 FunFam D2/4-type cyclin 68 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15306g00001 Mupr-Chr15306 2364 5558 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15306g00001 9 342 Core Cell Cycle Gene Families AT1G70210 62.202 4.65e-136 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15306g00001 K18810 - gmx:100818190 579.711