Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15298g00001 TACCCAATTGGTGAAATTGGTTTAGCATTTGATGCTCCCGTCAGAGACACCCCAGTAAAGGGAACTCTGCTAAATTCTGTCTCTTTCGGGACTATTGAGTTAGTTCAGATGGGGGGTCAGGAGAATGCCATGGGGTTTCAACATGGAAATGAGAGCATTCTGACTTGTCCATCTTCGGGTCTCAGTGGTGCAAATGTTAATGTTTCAGAAATGGCTATTAGTTCTGTGTCCATGGCCAAGCCTTCTGATGTAGCTAACCCTTTTCTTGCTTCTTCCGCTTGGGATCCACTTGTTTCCTTGAGTCAGGCTCAAACTTTTGGAGGCTCCTCAATGGTTACTCATAGTGACTTTGCCAATGCCAACTCTTCTTACCCTCTTGTTTTGGAAAACCAGGGAATGAGCAACACTTCCCACCTTGTTCAGTACATGTCTGACTCAAATCTTGGGGGCATGGTCCCCAAGGTTCACTCCTATGCAAGTGGGGGCTTCTCAGAAATGGTTGGTGCTGCCTCTTTTGGCCAACATGGCTCCGGTGATATGGGGTATCCACCACATTATAATCCGATCAAGGAGCCTCCTATAAATGGTGAACAATCTCAGGTTGAGGACTCAATTCTTGAAGAGGAAGCACCAGGATCTGCACCTAGTGGTAATAGAAGAAAGAGGGGGCTTGATCATAATTCTACCTTCAGTCCAAATAAGAATGGTGAGGGTGATGCTGTGAAAGATTCTCCTGGGAAGTCCTCTGATGGTCCAAAAGAACATGAAAAGAAGCCAAAAGTTGAGCAGAATAACAGTGCAGATTTGCGTGGCAAGCAATCAGTGAAGCAAACTAAAGACAACAATTCTCAGAGTGGAGAAGCTCCCAAAGATAATTTCATTCACGTGAGAGCTAGAAGAGGTCAAGCCACAAATAGCCACAGCCTTGCAGAAAGGGTGAGAAGAGAAAAGATTAGTGAGCGAATGAGGTTGCTTCAAGAACTTGTTCCAGGATGCAACAAGATAACTGGCAAAGCTGTAATGCTGGATGAGATAATAAACTACGTGCAATCACTTCAGCAACAGGTTGAGTTTTTGTCCATGAAACTTGCCACAGTGAACCCAGAACTGAACTTTGATTTAGACCGGATCCTATCCAAGGATATTCTCCAATCACGCATAGGACATGGAATTGGTGCATATGGTCCTGGTATCAATTCCTCTCACACATTCCCCAATGGAAGTTTCCATGGAACACTGGCTGGCATGCCTAGTACATCATCACAATTCCCTCCTTTGCCCCAGAGTGTTTTGGACCACGAGTTCCAAAGCTTCTATGGAATTGGATACGATTCTAATACAGCACTTGACAACTTGGGATCCAATGGTCGGTTGAAAACAGAGTTATAG 1389 0.4478 YPIGEIGLAFDAPVRDTPVKGTLLNSVSFGTIELVQMGGQENAMGFQHGNESILTCPSSGLSGANVNVSEMAISSVSMAKPSDVANPFLASSAWDPLVSLSQAQTFGGSSMVTHSDFANANSSYPLVLENQGMSNTSHLVQYMSDSNLGGMVPKVHSYASGGFSEMVGAASFGQHGSGDMGYPPHYNPIKEPPINGEQSQVEDSILEEEAPGSAPSGNRRKRGLDHNSTFSPNKNGEGDAVKDSPGKSSDGPKEHEKKPKVEQNNSADLRGKQSVKQTKDNNSQSGEAPKDNFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFDLDRILSKDILQSRIGHGIGAYGPGINSSHTFPNGSFHGTLAGMPSTSSQFPPLPQSVLDHEFQSFYGIGYDSNTALDNLGSNGRLKTEL 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15298g00001 462 CDD bHLH_AtBPE_like 292 377 - -
Mupr15298g00001 462 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 213 410 IPR024097 GO:0006355
Mupr15298g00001 462 MobiDBLite consensus disorder prediction 175 293 - -
Mupr15298g00001 462 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 302 352 IPR011598 GO:0046983
Mupr15298g00001 462 Pfam Helix-loop-helix DNA-binding domain 305 353 IPR011598 GO:0046983
Mupr15298g00001 462 SMART finulus 308 358 IPR011598 GO:0046983
Mupr15298g00001 462 MobiDBLite consensus disorder prediction 240 265 - -
Mupr15298g00001 462 MobiDBLite consensus disorder prediction 266 289 - -
Mupr15298g00001 462 FunFam Basic helix-loop-helix transcription factor 299 371 - -
Mupr15298g00001 462 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 300 370 IPR036638 GO:0046983
Mupr15298g00001 462 Gene3D - 299 373 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15298g00001 Mupr-Chr15298 2700 6842 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15298g00001 37 462 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 42.494 5.38e-81 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr15298g00001 HLH 5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15298g00001 - - gmx:100801930 791.571