Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1528g00002 ATGGAATTCGAGGATCAAGAGGAGCAAGAGGAAGAGCTGTGTATGGGTGGCGCCAGCTACGACCCGCTCGCCAACCCGACCCGGATGAAGATGCCGGGCGGGACGGAGCCCGTCATGGCGGCTCAGCCGGTGAGGAGCAGCACCAACGGCGGCGCCGGCAGGGCCAGGTACCGGGAGTGCCTCAAGAACCATGCCGTCGGCATCGGTGGCCACGCCCTCGACGGCTGCGGCGAGTTCATGCCGGCGGGGACGGAAGGTACGCTGGACGCGCTCAAATGCGCCGCCTGCAGCTGCCACCGCAACTTCCACCGCAAGGAGACGGACGCGGTGGCCATGACCGGCGACCCGTACTTGCTGACTCACCACGCGCACCTCCACCCTCCGCCGCCACCGCCGCAGTTCGCGGCGTACTACCGGACTCCGGCGGGGTACCTGCACGTGGGTGGGCAGCAGCGGGCGACGGGGACGCTGGCGCTGCCGTCGACGTCCGGCGGCGGCGGGACGCAGAGCACGAGGGAGGACCAGGAGGACGTTTCGAACCCGAGTGCAGGAGGAACGGGGTCGAAGAAAAGGTTCAGAACGAAGTTCACGCAGGAACAGAAGGACAAGATGCTTGATTTAGCCGAGAAATTAGGTTGGAGAATTCAAAAACACGACCAGGATGTGGTCCAAGCGTTCTGTAACGAAACCGGGGTGAAGCGTCACGTTCTCAAGGTTTGGATGCATAACAACAAGCACACTCTCGTTTGTTACAACGGTGGTGACGCCTTTGGAACTTTATTTTTCGGGTGGATGATATCAGATATAAAGATCAAGGTTAAGATGTCATCTACTTTGTTTGATAAGATATACTCAATCCTAAGACACTTGTCGGAACTAAGAAGCAGGAACTTTCTCAGTACCTTCAATGCGTTCTCACTCACCTGCATTTTCCGTTTTACATTTTCTCATTCAATTCGTCTTTCCTCTCTTTTTCTTCTTCGGCTAACGGCAAGCCTTTTTTGCTCGTACCGCGCACTGAAGAAAGATATGCTTTTATGGACAGCTTGCTTCTTAAGTAGTCCAAAGCCTGCCCATTACCAATACACGTTTAAGATGCTATGCTTGTTTTGGGGTGTTGAGCATCAGTTAAAGCTGCGTGCTTCAACTGTGGTCCACACAATGCAATGCAATGTAATGTAA 1182 0.5525 MEFEDQEEQEEELCMGGASYDPLANPTRMKMPGGTEPVMAAQPVRSSTNGGAGRARYRECLKNHAVGIGGHALDGCGEFMPAGTEGTLDALKCAACSCHRNFHRKETDAVAMTGDPYLLTHHAHLHPPPPPPQFAAYYRTPAGYLHVGGQQRATGTLALPSTSGGGGTQSTREDQEDVSNPSAGGTGSKKRFRTKFTQEQKDKMLDLAEKLGWRIQKHDQDVVQAFCNETGVKRHVLKVWMHNNKHTLVCYNGGDAFGTLFFGWMISDIKIKVKMSSTLFDKIYSILRHLSELRSRNFLSTFNAFSLTCIFRFTFSHSIRLSSLFLLRLTASLFCSYRALKKDMLLWTACFLSSPKPAHYQYTFKMLCLFWGVEHQLKLRASTVVHTMQCNVM 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1528g00002 393 MobiDBLite consensus disorder prediction 155 193 - -
Mupr1528g00002 393 MobiDBLite consensus disorder prediction 1 52 - -
Mupr1528g00002 393 FunFam Zinc-finger homeodomain protein 2 176 249 - -
Mupr1528g00002 393 SUPERFAMILY Homeodomain-like 177 247 IPR009057 -
Mupr1528g00002 393 Pfam ZF-HD protein dimerisation region 55 107 IPR006456 -
Mupr1528g00002 393 NCBIfam homeobox domain, ZF-HD class 189 245 IPR006455 -
Mupr1528g00002 393 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 57 106 IPR006456 -
Mupr1528g00002 393 Gene3D - 174 250 - -
Mupr1528g00002 393 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 48 248 - -
Mupr1528g00002 393 MobiDBLite consensus disorder prediction 155 187 - -
Mupr1528g00002 393 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 56 106 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1528g00002 Mupr-Chr1528 11199 13793 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1528g00002 1 251 ZF-HD Transcription Factor Family AT4G24660 48.627 7.15e-67 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mupr1528g00002 ZF-HD_dimer 3.7e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1528g00002 - - gmx:100795063 372.859