Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15263g00005 ATGGATAAGCAAATTATGTCATCTCCTAATAATACATTGGTACAGTGTCGAATTTGCCACGATGAGGATGAAGACTCAAATATGGACACACCCTGTTCTTGTTGTGGCACATTGAAGTATGCACACCAAAAATGTGTTCAAAGATGGTGCAATGAGAAAGGTGATACTACCTGTGAAATTTGCCAACAGCAACTTAAACCTGGCTATACTGCACCTCCACCGCCTCCTCTATTCCATTATGGGTACATAGGGAACTGGGAGATTTCAAGAAGAGATCTTCACTTCATAGCAATGTTTAGTGCTAATCGTGAATTCCTAGACCTTGCCTTTGAATATTCATCAGCACCCTCTACAAGAAGCCTGATATTTTGCCGCATTGTTGCCATTATTTTTATTGTTCTTCTTCTTTTACGCCATACACTTCCAATCATACTTATACTCAGTGGAGCAGGAGAATATTCATTGACAGTGTTTATGTTAATAGTATTGAGAATCATGGGCATAATTGTACCCCTGTATATAATTGTTAAAGCTATTATTGCAATCCAACGGTTTCAATACCAGGGTCATGATGATTCCCCTGTGCAAGCACATGAAGAAAATGAAATAGGAGAATCTCAGTCCCGTAATTTGATGATTTCTTCATCCGAAGTTGACCACGAAATCACTGATTATGAATGA 681 0.3862 MDKQIMSSPNNTLVQCRICHDEDEDSNMDTPCSCCGTLKYAHQKCVQRWCNEKGDTTCEICQQQLKPGYTAPPPPPLFHYGYIGNWEISRRDLHFIAMFSANREFLDLAFEYSSAPSTRSLIFCRIVAIIFIVLLLLRHTLPIILILSGAGEYSLTVFMLIVLRIMGIIVPLYIIVKAIIAIQRFQYQGHDDSPVQAHEENEIGESQSRNLMISSSEVDHEITDYE 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15263g00005 226 FunFam Zinc finger family protein 4 71 - -
Mupr15263g00005 226 CDD RING_CH-C4HC3_MARCH 16 62 - -
Mupr15263g00005 226 Pfam Protein of unknown function (DUF3675) 67 179 IPR022143 -
Mupr15263g00005 226 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 70 IPR013083 -
Mupr15263g00005 226 ProSiteProfiles Zinc finger RING-CH-type profile. 8 68 IPR011016 GO:0008270
Mupr15263g00005 226 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 9 186 IPR033275 -
Mupr15263g00005 226 Pfam RING-variant domain 16 61 IPR011016 GO:0008270
Mupr15263g00005 226 SUPERFAMILY RING/U-box 13 65 - -
Mupr15263g00005 226 SMART ringv_2 15 62 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15263g00005 Mupr-Chr15263 20964 22809 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15263g00005 16 62 C3H Transcription Factor Family AT2G37950 48.000 4.23e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15263g00005 - - gmx:100784696 328.176