Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15263g00003 ATGCCGAAGCCTGTCGGAGGTCTTTCACGTGAGCTTTATTTTGGATTAATCTGTTTCAACGCTTCTGGTTTTTCACTCAGGAATCCTGCAAGATCTGCTGTAGCAGATTCCAAGGTGAAGGCTATTATCCATTTGGGAGCAATTGAGTTGCTTGGAGAGTGTTTTTCGTCTTCTAGAAAAAAGAACAGGCCGGTGCCGAGAAGGCTTAGCTGTATGCATCGTGCACCATACCAGGAACATTCTGATCTCTGTATCATCATGGCCTTACAGAACATTGGTGCTAGCAACAGTGATGATGCCTTCTATAGGTATAAGATGCCTAAAATGATTACCAAAATTGAGGGCAGAGGTAATGGCATCAAAACAAATATTGTCAATATGGTTGATATTGCGAAAGCCTTGGCAAGGCCAGCTTCATACACAACAAAGTATTTTGGTTGTGAGCTTGGAGCCCAATCAAAATTTGATGAGAAAACTGGGACTTCTCATGTTAACGGGGCACATGAAACTGCAAAACTTGCTGGCCTTCTTGAGATCTTCATTAAGAAATATGTCCAGTGTTATGGTTGTGGAAATCCTGAAACCGAGATCTTAATCACCAAGAACCAAATGATCCAGCTGAAATGTGCTGCTTGTGGTTTTGTGTCTGATGTTGATATGAGAGACAAGCTAACTACTTTCATCATTAAGAATCCTCCAGAAGTTAAGAAAGGATCCAAAGACAAGAAGGCCATGAGGAGAGCTGAGAAGGAGAGACTGAAGGAAGGTGAAGCAGCTGACGAGGAACTGAAGAAATTGAAGAAAGAGGTTAAGAAGAAAGGAACTTCATCTTCTAAGGATGGCCCCACGAAATCTACCTCTTCAAAGAAAAAGGCTAATGGCTCTGATGAAGACCGTGCATCTCCCCCTCGCAGTCAAGTTGATGAGAAGGATGAGGCTCATGAGGAAGAAGATGATGGTGATGATGTACAATGGCAGACAGATACATCACTGGAGGCTGCTCGTCAACGAATCCAGGAACAGTTGAGTGCCGTGACAGCTGATATGGTCATGCTCTCCACAAATGAACCAGAGAAGGAGGAGAAAGCAGCAACTAAGGTAAGTAACAACTCTGAGAATGGTAACAACGTGAGCAGCAAGACACTGGTTGGCGAAGTCAAAGCAAAATTGAATAAAGGTGTTAAGGCAAAAGAATTGCTATCCTATCTGGCAGCACATCCTGCATCGGCTCAGGAAAAGATGAGTGCTCTGTATGAAGCCTTATTTGAGGGCATCGAGAAAGGCTTTGCAAAAGAAGCAATTAAGAAGAAGAGCTACCTTGCTGCTGCAGTTGCTGAGGAAGAGGGTTTGCAGTTGTTACTGCTTCGTGCAATTGAGGAATTCTCTTGTAAGTTCACTCCCAATGCGTTGAAGGAGGTAGCACTGGTTCTGAAGGCACTCTACGATGCTGATGTATTAGATGAAGAGCACATAGTGCAGTGGTATCAAAAGGGACTGAAGGGCGATAACAAGAACTCTCAGATTTGGAAGAATGCTCAACCTTTCGTTGATTGGCTTCAGAATGCAGAATCAGAATCGGAGGAAGAATAA 1590 0.4352 MPKPVGGLSRELYFGLICFNASGFSLRNPARSAVADSKVKAIIHLGAIELLGECFSSSRKKNRPVPRRLSCMHRAPYQEHSDLCIIMALQNIGASNSDDAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSHVNGAHETAKLAGLLEIFIKKYVQCYGCGNPETEILITKNQMIQLKCAACGFVSDVDMRDKLTTFIIKNPPEVKKGSKDKKAMRRAEKERLKEGEAADEELKKLKKEVKKKGTSSSKDGPTKSTSSKKKANGSDEDRASPPRSQVDEKDEAHEEEDDGDDVQWQTDTSLEAARQRIQEQLSAVTADMVMLSTNEPEKEEKAATKVSNNSENGNNVSSKTLVGEVKAKLNKGVKAKELLSYLAAHPASAQEKMSALYEALFEGIEKGFAKEAIKKKSYLAAAVAEEEGLQLLLLRAIEEFSCKFTPNALKEVALVLKALYDADVLDEEHIVQWYQKGLKGDNKNSQIWKNAQPFVDWLQNAESESEEE 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15263g00003 529 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 89 528 IPR045196 GO:0003743|GO:0006413
Mupr15263g00003 529 FunFam Eukaryotic translation initiation factor 5 87 190 - -
Mupr15263g00003 529 SUPERFAMILY ARM repeat 380 523 IPR016024 -
Mupr15263g00003 529 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 184 219 IPR016190 GO:0003743|GO:0006413
Mupr15263g00003 529 CDD W2_eIF5 412 527 - -
Mupr15263g00003 529 Gene3D - 86 190 - -
Mupr15263g00003 529 Pfam Domain found in IF2B/IF5 97 213 IPR002735 GO:0003743|GO:0006413
Mupr15263g00003 529 Pfam eIF4-gamma/eIF5/eIF2-epsilon 451 529 IPR003307 GO:0005515
Mupr15263g00003 529 FunFam Eukaryotic translation initiation factor 5 191 231 - -
Mupr15263g00003 529 SMART eIF2Bneu4 101 215 IPR002735 GO:0003743|GO:0006413
Mupr15263g00003 529 Gene3D - 371 529 - -
Mupr15263g00003 529 Gene3D - 191 231 - -
Mupr15263g00003 529 ProSiteProfiles W2 domain profile. 372 529 IPR003307 GO:0005515
Mupr15263g00003 529 MobiDBLite consensus disorder prediction 233 324 - -
Mupr15263g00003 529 Coils Coil 253 273 - -
Mupr15263g00003 529 MobiDBLite consensus disorder prediction 234 311 - -
Mupr15263g00003 529 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 96 187 IPR016189 GO:0003743|GO:0006413
Mupr15263g00003 529 SMART 542_3 437 525 IPR003307 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15263g00003 Mupr-Chr15263 16653 18921 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15263g00003 87 522 Eukaryotic Initiation Factors Gene Family AT1G36730 64.494 3.26e-180 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15263g00003 K03262 - gmx:100777906 696.427