Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15237g00004 ATGGATAGGCCCCCTTCTCCATCTTACGTGGTGGTTGCATGTGATGCCACTAGGGACCGCACTGAACACGAAATCAAACTCATTGCTGATCATGTTCGGACCAGGGGTGTTTTTCTCACTTCTGGTGACAAGTTGCTTGTGCTCTGTGTCTTGCATAAGGTGTCTCACCCTATGGGGTACCAGACATTAGCATGCCCCGAGTCTTTCGCTGGCACGAACTTTCGTGCAATGGAGGACGAAGTCAGAAAGAAAGTTGATGCATATGCAACTGAACTTTTGTCAAGTTATGAAGATTTTCAAAGTGAAGGGGTTAGTATCGAAGTTAAAGTCACCGCGGGATTTCCAGTTAAACAGGTTGTTTTACAAGAGGTGACAAACTATGATGCATCTTGGATAATACTTGACAGACATCTTCGGCGCGACCTGAGGTACCACCTTAACAAGATGCCATGTAAGGTTGCATTGGTTAAAGATGACTTGTCTCTGGAGATCTGGAGATCTCATTATGCACATGACACAAAGGTCACAGGAACAAAGTTTGTGTATTCTTTGTCAAAGTTTGTGTCGCTATCAGATTGTCATAGTATTGAAGACATTGAGCAGTCTATTATCTCTTGCAAAAGTTATCCCCATTCTATAGCTTCTGATAGCTCTAGTTCGATTAGGAGCTATAAGCATTCAAGTGCTAACAGGTCGCGGGAGCACAGTTCCTTATCAGATTTTGGATCTTCTTCTAAGCAAGAAAGATCAGGCATAAGCATGAAAGGAGAATATAGACCTTTCATTACTTCTCAGATTGACGAAAAGCAAATCCAATGTAGCTTTCTGTCAAAACATTCAGATGCACCACTTCTCTGTACTGGCTGTGGAACAAGAACTGAGTTGTTTATCAAGGAGTCAATGAGGTTCAGCTATTCTGACGTACAAAATGCAACAAATGATTTTTCAAAGGATAACTTATTAGGCGAAGGTGGATATGGTCACGTATACAAGGGTGTGCTTAAAGATGGACAGCAAATTGCCGCAAAGGTAAGAAAAGAACAAAGCTCACAAGGATTTTCTGAATTTCACTCTGAGGTCTACGTCTTAAGTTTTGCTCGACACAAGAACATAGTGATGCTGTTGGGTTACTGTTGCAAAGAAAATAAAAACATCCTGATTTATGAATATATTTGCAACAAGTCTCTCCATTGGCATTTATTTGAAAATGAAGCGGTTCTTGAGTGGTCCCAAAGGTATGCTATTGCTATTGGGACTGCAAAGGGATTGCGTTTTCTACATGAAGAATGCCGTGGTAGTCCTATTATTCATCGGGATATGCGACCAAGCAATATACTTCTCACCCATGATTTTGTTCCCATGCTAGGTGACTTTGGCCTTGCAAAATGGAAAACTGGTGATGATACTCTGCGTACAAGGATAATGGGCACATTAGGATACCTTGCCCCTGAGTATGCCGAAGACGGCATTGTTTCTGTGGGAACAGATGTGTATTCTTATGGTATTATTCTGTTACAATTGATATCAGGACGTCGGGTTGGCAATTCCAATAATCCAGAACAACAACAATCTCTACGGCAATGGGCTAAACCAATGATAGAGAAGTTGGCTTTACATGAACTGATCGACACTCGTCTAGGGGAATCATATGACACGTATGAACTGTACCTCATGGCTAAAGCAGCATACTTCTGTGTGCAAAGGAAGCCTGAGATGCGTCCATCAATGGCAGAGGTTGTGCGGCTTCTTCAGGGAGAAAGTAGCCACTTCCACTCCTTGGAAGAACAATTTGTACCTAATTATGACTGTTGA 1812 0.42 MDRPPSPSYVVVACDATRDRTEHEIKLIADHVRTRGVFLTSGDKLLVLCVLHKVSHPMGYQTLACPESFAGTNFRAMEDEVRKKVDAYATELLSSYEDFQSEGVSIEVKVTAGFPVKQVVLQEVTNYDASWIILDRHLRRDLRYHLNKMPCKVALVKDDLSLEIWRSHYAHDTKVTGTKFVYSLSKFVSLSDCHSIEDIEQSIISCKSYPHSIASDSSSSIRSYKHSSANRSREHSSLSDFGSSSKQERSGISMKGEYRPFITSQIDEKQIQCSFLSKHSDAPLLCTGCGTRTELFIKESMRFSYSDVQNATNDFSKDNLLGEGGYGHVYKGVLKDGQQIAAKVRKEQSSQGFSEFHSEVYVLSFARHKNIVMLLGYCCKENKNILIYEYICNKSLHWHLFENEAVLEWSQRYAIAIGTAKGLRFLHEECRGSPIIHRDMRPSNILLTHDFVPMLGDFGLAKWKTGDDTLRTRIMGTLGYLAPEYAEDGIVSVGTDVYSYGIILLQLISGRRVGNSNNPEQQQSLRQWAKPMIEKLALHELIDTRLGESYDTYELYLMAKAAYFCVQRKPEMRPSMAEVVRLLQGESSHFHSLEEQFVPNYDC 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15237g00004 603 Pfam Protein kinase domain 316 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr15237g00004 603 CDD STKc_IRAK 321 585 - -
Mupr15237g00004 603 MobiDBLite consensus disorder prediction 234 251 - -
Mupr15237g00004 603 ProSitePatterns Protein kinases ATP-binding region signature. 321 343 IPR017441 GO:0005524
Mupr15237g00004 603 Gene3D Phosphorylase Kinase; domain 1 286 390 - -
Mupr15237g00004 603 MobiDBLite consensus disorder prediction 224 252 - -
Mupr15237g00004 603 ProSiteProfiles Protein kinase domain profile. 315 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr15237g00004 603 Gene3D Transferase(Phosphotransferase) domain 1 391 597 - -
Mupr15237g00004 603 Gene3D HUPs 6 157 IPR014729 -
Mupr15237g00004 603 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 287 390 - -
Mupr15237g00004 603 PANTHER OS01G0253100 PROTEIN 220 586 - -
Mupr15237g00004 603 SUPERFAMILY Protein kinase-like (PK-like) 299 584 IPR011009 -
Mupr15237g00004 603 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 391 595 - -
Mupr15237g00004 603 ProSitePatterns Tyrosine protein kinases specific active-site signature. 435 447 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15237g00004 Mupr-Chr15237 35198 39378 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15237g00004 303 583 Trihelix Transcription Factor Family AT5G38560 45.329 3.80e-79 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Mupr15237g00004 Pkinase 1.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15237g00004 - - vun:114163670 1037.71