Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15236g00003 AAACAAAGCCCGGTCCAGCCCAGCCTCTCTCTCCTCTGTGTAACCCTAATTCCGAAAGCCATTAAAAAGCAGGCCAGTCCTTCTTTGGTTCATTTGCGCGGCGCACAACTGAACACTTCTGCTTTGGATTCCGATCGCACGCGCCGTCATCATGGTGAACGTTCCAAAAACGAAGAAGACATACTGCAAGAGAAGCACACCCTGCACAAGGTTACCCAATACAAGAAGGGTAAGGATAGCATCGCTGCTCAGGGAAAACGCCGTTATGATCGCAAACAATCCGGTTATGGTGGACAAACCAAGCCTGTCTTCCACAAGAAGGCTAAGACCACCAAGAAGATTGTCCTGAGGTTGCAATGCCAGGGTTGCAAGCATGTCTCCCAACACCCTATTAAGAGGTGCAAGCACTTTGAGATTGGTGGCGACAAGAAGGGGAAGGGAACATCTCTTTTCTAG 456 0.4956 KQSPVQPSLSLLCVTLIPKAIKKQASPSLVHLRGAQLNTSALDSDRTRRHHGERSKNEEDILQEKHTLHKVTQYKKGKDSIAAQGKRRYDRKQSGYGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKGTSLF 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15236g00003 151 Pfam Ribosomal protein L44 65 140 IPR000552 GO:0003735|GO:0005840|GO:0006412
Mupr15236g00003 151 MobiDBLite consensus disorder prediction 43 94 - -
Mupr15236g00003 151 SUPERFAMILY Zn-binding ribosomal proteins 64 140 IPR011332 GO:0006412
Mupr15236g00003 151 FunFam 60S ribosomal protein L44 46 151 - -
Mupr15236g00003 151 Gene3D - 56 151 - -
Mupr15236g00003 151 ProSitePatterns Ribosomal protein L44e signature. 109 120 IPR000552 GO:0003735|GO:0005840|GO:0006412
Mupr15236g00003 151 PANTHER 60S RIBOSOMAL PROTEIN L36A/L44 64 151 IPR000552 GO:0003735|GO:0005840|GO:0006412
Mupr15236g00003 151 MobiDBLite consensus disorder prediction 41 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15236g00003 Mupr-Chr15236 10196 11233 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15236g00003 64 151 Cytoplasmic Ribosomal Protein Gene Family AT3G23390 94.318 3.58e-56 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15236g00003 K02929 - han:110877507 186.422