Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15232g00002 ATGGCAGCAGAAGAAGAAGAGCAGTTGCAACAGCTGAGATCCAAAGCCACAGAGCTTTTCCTCAGAGAAGAATGGATTGCCTCGATCGAAGCTTACTCTCACTTCATCACCCTTTGCACCCAAACCCATAAGCATCGCAGATCCCTCTGCATTGCCCTCTGCAACCGCGCAGAAGCAAGGTTCAAATTGAAGGACTTCCGCTGCGCCCTGCAAGACTGTGACCACGCTCTGGACCTCGATGCCTCGCATTCCAAGACCCTTTTCTGCAAAGGTAAGATCTTGCTCTGCCTCAACCGCTACTCCGCCGCGCTCCACTGCTTCAGAACCGCTTCTCTTGACGGGAACGCCGAGAGCGTTATTGGGTACTTGGAGAGGTGCAAAAGTTTGGAGCTTTTGTCGCGGACTGGGTGTTTGGATCTTTCCGATTGGGTCTTAAATGGGTTTCGTGGTAAGGTTCCAGAACTCGCCGAGCACGTTGGTGCTGTGGAGATTAAAAAATCTGAGATCAGTGGGAGAGGGTTGTTTGCGACGAAGAATATTGATTCTGGGTCGTTGATCTTGGTGACTAAGGCGATTGCCATGGAGAGGAGTATCATTTTGGGAGGGGTTCAGGATCTGTGCGAGGAAGCGCAGTTGGCAATGTGGAAGAATTTCGTTGGCAAGGTTTCTGAGTTTGTTGGGAAGTGTCCCAGGACAAGGGGTTTGGTTCGTTTGTTGTCGTGTGGGGAGAATGAGGATGAGCTTGAGGTGCCTGATGTTGGTCTCTTTAGGCCTGAGGGTGAGGGTTTGGAGAAGGATGAGGTTGAGGAGGTTGGTGATGGTGTTGATATGGTTGAGTTGGTTAGTGTGTTGGATGTGAATTCTCTCACTGAGGATGCTGTTTGTGCCAATGTGTTGAGGAGGGGAAATGATTGTTATGGTGTTGGCCTCTGGCTGCTCCCTTCTTTCATAAACCACTCTTGTTGTCCCAATGCAAGGAGGTTGCATGTTGGGGACTACTTGGTGGTTCATGCTTCTAAAGATTTGAAGGCTGGTGAGGAGGTTACATTTGCTTATCTTGACCCTTTGTGTGGTTTGAGCAAGAGGAAGGAGATGTCAGTGAATTGGGGGATTCATTGCAAGTGCAAGAGGTGCAGGTTTGAGGGGGAGGTATTTGGGAAGCAAGAGGTGAGGGAGATTGAGATTGGGCTTGAGAGAGGGATGGATGTGGGGGGTGTGGTGTATAAGTTGGAGGAGCAGATGAAGAGGTTGAAGGTGAGGGGGAAGGAGAAAGGGTATTTGAGGGCATCATTTTGGGGAGCATATTCTGAGGCTTATAGGTCAGAGAAGGCCATGAAGAGGTGGGGGAGGAGGATTCCTGCAGTGGAGGTTGTGATTGATAGCATCATTGATGTGGTGGGTGGGGATCATAGGTTGCTTAAGATGATGGTGGAGGAGTTGAAGAAAAATAGTGCTGGACTTGTGGAGAGGGAGAAAGTTTTCAAGATGGCAAGACAAGTGTTTGGGAAGGTTGTGAAAAAGCAAGCAATCAGTACACTCCTTGAGCTCTGCATTGGGTTTGTGCGTATAAGTCGGCGCTATTATAGAAAAATGAAAATCATTAGCGATATACACAGGGACGAATATAAGGGACAGAATACACGGTAG 1647 0.4888 MAAEEEEQLQQLRSKATELFLREEWIASIEAYSHFITLCTQTHKHRRSLCIALCNRAEARFKLKDFRCALQDCDHALDLDASHSKTLFCKGKILLCLNRYSAALHCFRTASLDGNAESVIGYLERCKSLELLSRTGCLDLSDWVLNGFRGKVPELAEHVGAVEIKKSEISGRGLFATKNIDSGSLILVTKAIAMERSIILGGVQDLCEEAQLAMWKNFVGKVSEFVGKCPRTRGLVRLLSCGENEDELEVPDVGLFRPEGEGLEKDEVEEVGDGVDMVELVSVLDVNSLTEDAVCANVLRRGNDCYGVGLWLLPSFINHSCCPNARRLHVGDYLVVHASKDLKAGEEVTFAYLDPLCGLSKRKEMSVNWGIHCKCKRCRFEGEVFGKQEVREIEIGLERGMDVGGVVYKLEEQMKRLKVRGKEKGYLRASFWGAYSEAYRSEKAMKRWGRRIPAVEVVIDSIIDVVGGDHRLLKMMVEELKKNSAGLVEREKVFKMARQVFGKVVKKQAISTLLELCIGFVRISRRYYRKMKIISDIHRDEYKGQNTR 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15232g00002 548 CDD SET_SMYD 299 378 - -
Mupr15232g00002 548 Gene3D Tetratricopeptide repeat domain 4 129 IPR011990 GO:0005515
Mupr15232g00002 548 SUPERFAMILY TPR-like 7 110 IPR011990 GO:0005515
Mupr15232g00002 548 SMART tpr_5 84 116 IPR019734 GO:0005515
Mupr15232g00002 548 SMART tpr_5 50 83 IPR019734 GO:0005515
Mupr15232g00002 548 Gene3D SET domain 261 382 IPR046341 -
Mupr15232g00002 548 SMART set_7 160 359 IPR001214 GO:0005515
Mupr15232g00002 548 ProSiteProfiles SET domain profile. 160 353 IPR001214 GO:0005515
Mupr15232g00002 548 SUPERFAMILY SET domain 162 378 IPR046341 -
Mupr15232g00002 548 Pfam SET domain 171 352 IPR001214 GO:0005515
Mupr15232g00002 548 Coils Coil 2 22 - -
Mupr15232g00002 548 PANTHER TPR DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_5G12710) 4 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15232g00002 Mupr-Chr15232 8913 11120 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mupr15232g00002 SET 1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15232g00002 - - gmx:100812233 867.07