Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1522g00001 AGCAGCACTGTTCCAAGCCTTTTTTATCTCTTCAAGTCTGGTCTTCGTGAGACATGTGGGTTTAACGACTCCAAGACAATCTTATTATATGGTTCCAGTGGCTTATCTTTGGAGTTTTTGGGCTTATTGGACCATGGTGGTTCACTCATATGCATATTTAGAATCACCAAAAGTATGGAAGGTCCTCTTGGCAGCATGGTTATGGGCAGAACATTGTTCCTCTTGGTTTTCTGCTTGTGGATTCCCTTGGAAGTGGTGGGGAGGGAAGGACCTTCTTCAACTACCAGTGTGAATTCCACTGTTTCTTCGAGACCGACTGTTGTGAAATTTGGGGCCCTCTTTACTATGGATTCTGTCATTGGGAGATCGGCTAAACCTGCAATTTTAGCTGCGGTTAATGATGTTAATTCTAGCACGACCATTCTCCCTGGAATTGATCTGCAAGTTATTTTACATGATTCTAATTGCAGTGCATTTCTGGGAACAATTGAAGCTCTGGAGTTGATGGAGAATGATGTGGTTGCTGTTGTTGGTCCACTATCATCTGGAATAGCTCATGTCATCTCTCATGTTGTTAATGAACTCCATGTACCTCTTCTATCGTTTGGGGCAACTGACCCCACTCTATCTGCTCTACAATACCCATATTTTATCCGCACTACTCAGAACGACTACTTTCAGATGTTTGCAATTGCAGACTTTGTTGATTATTACAGGTGGAAGGAGGTAATTGCCATTTTTGTTGATGATGACAATGGAAGGAATGGAATTTCTGTATTGGGTGATGCACTGTCAAGGAAACGTGCCAAGATCTCTTACAAGGCTGCTTTCCCTCCTGGGGCCAAAGAAAGTGACATCAGTGACTTGCTAAATGAAGTGAACTTGATGGAATCGCGGATATATGTTCTCCATGTGAATCCTGATTCTGGTTTATCAATTTTCTCTATTGCCAAGAGTCTGAGAATGATGAGTAGTGGCTATGTTTGGATTGCAACAGATTGGCTTCCTTCAGTGCTGGATTCCTTAGAGACACCTGATACTGCCACAATGGATCTCTTACAAGGGGTTGTGGCTTTTCGCCATCACGTTCCTGATACTGATCTCAAGAAGAGTTTTCTCTCCAAGTTGAAAAGCCAAAGAGACAAGGAAACTTCAAGCTTTAATTCCTATGCATTTTATGCATATGATTCTGTTTGGTTGGCAGCTCGTGCCCTTGATGCTTATCTCAATGAAGGTGGAAACATATCTTTCTCCAGTGACCCTAAGTTGCGCGATACAAACCAAAGCATGTTGCAGTTAGGATCACTTCGTTACTTTGATGGTGGTCCACAGTTTCTTCAGACAATTTTGAGAATGAACTTCACTGGTCTGAGTGGTCAGATTGGGTTTGATGTGGACAAGAATTTAGTTCGTCCAGCTTATGACATTCTAAATATTGGTGGTAGTGGATTCCGTACAATTGGTTATTGGTCTAATCACTCTGGTTTCTCAGTTATAGCTCCTGAAATTTTGTATGAGAAAGAGTCATCTAATACTTCTTTGATGAGTAATCAACGACTGTACAGTGTGATATGGCCTGGTGAGGCTACAGCTACACCAAGGGGATGGGTGTTTCCCAACAATGGACAGCCACTGAGGATAGCAGTGCCGAACCGAGTGAGCTACAAGGATTTTGTTTCTAAAGACAAAAACCCCCCATGGGTACATGGCTATTGCATTGATGTCTTTGAAGCAGCCTTAAGCTTGTTGCCTTATCCTGTGCCGCGAAAATATATGTTATATGGAAATGGTGAAAGGAATCCTAGCTACAATGACCTTGTGGAACAAGTTGCACAGAATGTGAGCATCTATGGGTCTAACTTTGATGCAGTTGTTGGAGATGTTACAATTGTCACAAATAGGACAAGGATTGTGGATTTTACACAACCATTCATGCCATCGGGGCTTGTTGTTGTTGTTCGTGTGGAGGAGAAGAAGTCAAGCCCTTGGTCTTTCCTTGTGCCATTCACTACTCAAATGTGGTGTATCACTGGTGTTTTCTTTCTTTTCGTTGGAACTGTTGTCTGGATTCTTGAGCACCGGCTCAATCCCGAGTTCCGTGGTTCACCAAGGAACCAACTTATAACAGTGTTTTGGTTTAGTTTCTCAACAATGTTTTTCTCACACAGGGAGAACACTGTGAGTGGACTTGGGCGATTGGTGCTAATTATATGGCTCTTTGTGGTGTTGATCATAAACTCAAGCTACACAGCTAGTTTGACATCTATCCTCACTGTGAAACAACTTTCATCTCAAATTGAAGGACTTGACAGCTTGATCGCAAGTACTCAACCGATTGGAATTCAAGATGGGTCATTTGCACGGAAGTATCTGTTAGATGACCTCAATATAGCTGAATCTAGGATAGTTATATTGAAAAACATGGAGGATTATATTGATGCCCTTCAGCGTGGCCCTAGTGGTGGAGGGGTTGTGGCAGTTGTTGACGAGCTTCCTTATATTGAGGTCTTGATGTCCAGCACTGGCTGTAAGTTCAGAACTGTTGGGCAAGAGTTCACTAAAAGTGGCTGGGGATTTGCATTCCAGAGGGACTCTCCCCTTGCTGTTGACTTGTCAACTGCCATTCTTCAACTCTCTGAGAGTGGGGACCTGCAAAAGATTCATGACAAATGGCTTAACAAAAAGGAGTGTGCAGCCACTGATATTGATTCAAACAAACTAGCTTTGACAAGCTTCTGGGGCCTCTTTCTTATATGTGGAATTGCATGTGTCATTGCCCTTATTGTTTTCTTTGCTAGAGTGTTCTGTCAATACAACAAATTCAACCCAGAGCCTGAGAAGATTGATGAGGAAATGCAACCAGTTAGATCTAGACGTCCAATCAGAACTTCTAGCCTCAAGAACTTGATGGGATTTGTAGATAAAAAAGAAGCAGATATCAAAGAGATAATTAGGGAACACAAGAAAAGGAGACACAGCCAGAGCTTGGATGAAAATTCTGTTTCACCAGCTACCTAG 3018 0.4238 SSTVPSLFYLFKSGLRETCGFNDSKTILLYGSSGLSLEFLGLLDHGGSLICIFRITKSMEGPLGSMVMGRTLFLLVFCLWIPLEVVGREGPSSTTSVNSTVSSRPTVVKFGALFTMDSVIGRSAKPAILAAVNDVNSSTTILPGIDLQVILHDSNCSAFLGTIEALELMENDVVAVVGPLSSGIAHVISHVVNELHVPLLSFGATDPTLSALQYPYFIRTTQNDYFQMFAIADFVDYYRWKEVIAIFVDDDNGRNGISVLGDALSRKRAKISYKAAFPPGAKESDISDLLNEVNLMESRIYVLHVNPDSGLSIFSIAKSLRMMSSGYVWIATDWLPSVLDSLETPDTATMDLLQGVVAFRHHVPDTDLKKSFLSKLKSQRDKETSSFNSYAFYAYDSVWLAARALDAYLNEGGNISFSSDPKLRDTNQSMLQLGSLRYFDGGPQFLQTILRMNFTGLSGQIGFDVDKNLVRPAYDILNIGGSGFRTIGYWSNHSGFSVIAPEILYEKESSNTSLMSNQRLYSVIWPGEATATPRGWVFPNNGQPLRIAVPNRVSYKDFVSKDKNPPWVHGYCIDVFEAALSLLPYPVPRKYMLYGNGERNPSYNDLVEQVAQNVSIYGSNFDAVVGDVTIVTNRTRIVDFTQPFMPSGLVVVVRVEEKKSSPWSFLVPFTTQMWCITGVFFLFVGTVVWILEHRLNPEFRGSPRNQLITVFWFSFSTMFFSHRENTVSGLGRLVLIIWLFVVLIINSSYTASLTSILTVKQLSSQIEGLDSLIASTQPIGIQDGSFARKYLLDDLNIAESRIVILKNMEDYIDALQRGPSGGGVVAVVDELPYIEVLMSSTGCKFRTVGQEFTKSGWGFAFQRDSPLAVDLSTAILQLSESGDLQKIHDKWLNKKECAATDIDSNKLALTSFWGLFLICGIACVIALIVFFARVFCQYNKFNPEPEKIDEEMQPVRSRRPIRTSSLKNLMGFVDKKEADIKEIIREHKKRRHSQSLDENSVSPAT 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1522g00001 1005 SUPERFAMILY Periplasmic binding protein-like I 103 537 IPR028082 -
Mupr1522g00001 1005 Pfam Bacterial extracellular solute-binding proteins, family 3 620 893 IPR001638 -
Mupr1522g00001 1005 FunFam Glutamate receptor 223 380 - -
Mupr1522g00001 1005 SUPERFAMILY Periplasmic binding protein-like II 520 894 - -
Mupr1522g00001 1005 Gene3D - 783 896 - -
Mupr1522g00001 1005 MobiDBLite consensus disorder prediction 986 1005 - -
Mupr1522g00001 1005 FunFam Glutamate receptor 662 792 - -
Mupr1522g00001 1005 CDD GluR_Plant 543 892 - -
Mupr1522g00001 1005 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 108 970 IPR015683 -
Mupr1522g00001 1005 Pfam Ligand-gated ion channel 894 923 IPR001320 GO:0015276|GO:0016020
Mupr1522g00001 1005 CDD PBP1_GABAb_receptor_plant 109 498 IPR044440 -
Mupr1522g00001 1005 Gene3D - 661 782 - -
Mupr1522g00001 1005 SMART GluR_14 546 894 IPR001320 GO:0015276|GO:0016020
Mupr1522g00001 1005 PIRSF IGluLR_plant 66 1004 IPR017103 -
Mupr1522g00001 1005 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 121 137 - -
Mupr1522g00001 1005 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 181 209 - -
Mupr1522g00001 1005 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 394 406 - -
Mupr1522g00001 1005 Gene3D - 127 471 - -
Mupr1522g00001 1005 FunFam Glutamate receptor 540 662 - -
Mupr1522g00001 1005 Gene3D - 223 496 - -
Mupr1522g00001 1005 FunFam Glutamate receptor 788 896 - -
Mupr1522g00001 1005 Gene3D - 540 660 - -
Mupr1522g00001 1005 Pfam Receptor family ligand binding region 125 480 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1522g00001 Mupr-Chr1522 2011 7256 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1522g00001 104 859 Ion Channels AT1G05200 67.328 0.0 1081