Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15213g00005 ATGAGTGGAAAAGACTACTCAAACACCAAGACCTACTTCCACGAAGTTGCAATCAAAGGATTTGGGACATGTATGATCCTGAGGGATATTCTCTGTGGTTCCTGTGATTACAAATACAATGATGAGAACACTGTTTCCTTTGTGACATTGAACAAGGTTGGTAGATTTCTTCAGCGGATGGATCTGGCTTGCAAGTATGCATTTGGAAAGATGCTGCTGCTAATTGTGATTGATGAATGCTATGATATTGATATTACAAAGAAACTTTTCAATTTCAATTGA 282 0.3759 MSGKDYSNTKTYFHEVAIKGFGTCMILRDILCGSCDYKYNDENTVSFVTLNKVGRFLQRMDLACKYAFGKMLLLIVIDECYDIDITKKLFNFN 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15213g00005 93 SMART EF1G_2 2 88 IPR001662 GO:0003746|GO:0006414
Mupr15213g00005 93 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 1 93 IPR001662 GO:0003746|GO:0006414
Mupr15213g00005 93 SUPERFAMILY eEF1-gamma domain 5 74 IPR036433 GO:0003746|GO:0006414
Mupr15213g00005 93 Pfam Elongation factor 1 gamma, conserved domain 4 74 IPR001662 GO:0003746|GO:0006414
Mupr15213g00005 93 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 3 87 IPR036433 GO:0003746|GO:0006414
Mupr15213g00005 93 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 5 74 IPR044628 GO:0004364
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15213g00005 Mupr-Chr15213 21317 21598 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15213g00005 6 73 Eukaryotic Initiation Factors Gene Family AT1G57720 69.118 1.40e-24 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15213g00005 K03233 - qsu:112015683 102.449