Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15213g00004 ATGGATGAGGATCGAAACGAGTTGGGTACTGTGCATGAAGGGAATGTTGATATTGGACATCAGACATCAAATGACTTGGACTTGAATGTGGAGCAGAACTGTTGCAGCCCGAATGTTGCTCATGCTAATGACATTCAATCCTGTCCTCCTTCATTGGCAAATGTAGTCAGTGCCAAAACTGTGCTGGGAATTGGTTCAAAATTTGAGTCTGATGATCATGCATACAGATTCTATAATAAGTATGCCAGATTAGCGGGTTTCAATGTTAGAAAAGATTGGATAAATAGGAGTAAGGTGCATGGTCAAGTGGTGTCTAGGAAGTTCACCTGCTCCAAAGAGGGATACCGGAGGAAAGACAAAAGAGATGTTAATGTGAAGAAACATAGGAAGGAAACGAGAACTGGCTGCATGGCACATATGATAGTTACCCGGCAACCAGATGGTAAATACCAGGTCACCCATTTTGAAGCTCAACATAATCATGACAATATAAACCCTAACAATGCTAACATGTTAAACTTGCAAAATGAATTTAGTGTTGCCCAAGCGGTGGAAGCTGACTCAAACAATAGATTGGGACCTAAATCAAAGTCAGCATTAGATATGTTGAATAAAAAAATATGTGCCCGAGAATCTCTTGATCAACTTTCAATGAATTATGACAATTACCTTCATTCTGCAAGGGAAAGAGATATGAGCGAAGGAGAAGCAGGGCGTTTGCTAGGTTACTTCCAAAGGCAGCACTTTGAAAATCCAACATTTTTTTATGCCATACAGCTTGACCTTGATGACAAGGTTAGCAATCTTTTTTGGGCTGATGACAATATGGTGGTGGATTATGACCATTTTGGTGATGTCATTTGTTTGGATACAACTTGCAGAACAAACAAAGATCTTCGGCCATTTGTACAGTTTTTAGGTGTTAACCATCACAAACAAGTGTTAATCTTTGCTGCTGCTTTTCTGTACGACGATTCTATTGAATCATTTAATTGGCTATTTCGAACTTTCATTAATGCTATGTCTGGGAAAAAGCCAAAGGCCATTCTTACAGAACAAGAAGTTGTAATTATTGAAGCAGTCAATACAGTTTTACCCGATACAAACCATTGTATATGTGTATGGCAGTTGTATGAGAACACTTTGAAACATCTCAGCCATGTTGTTAAGAATGCTGAGTCTTTTGCAAATGATCTACGGAGAAGTATTTATGACCCCAAGGATGAAGAAGAATTTACTCATGCTTGGGAGGCTATGCTAGAGAAGTTTAATCTCCAGCAAAATGAATGGCTGAGATGGATGTATAGAGAAAGAGAGAAATGGGCTGTTGTCTTTGGTCGGAATACATTTTTTGTAGACATCAAAGGCTTTCATTTAGGTGAGATTTTGTCTCATAACTTTCGAAGTTATCTAAATCTTGACCTTGATGTAGTTCAATTTTTTAAGCATTTTGAAAGGGTAGTAGATGAGCAGCGTTATAAAGAAATAGAAGCTAGTGATGAAATGAGCAGGTGTTTGCCAAGGCTAATGGGTAACGTGATTTTGCTGAAGCATGCAAGTGACATTTATACTCCAAGAGCATTTGAAGTATTTCAGCGAGCATATGAGAAGTCTTTAAATGTTCTTGTTAACCAACACATTAGAAATGGATCATTGTTTGAGTATAAAGCAAATACATTTGGGCATACTAGACAATACAGTGTCACCTTCAATTCTTCTGATGACACAGTTGTCTGCAGTTGTATGAAGTTTGAGCGTGTTGGATTTCTGTGTAGTCATGCACTTAAAGTTCTTGATCATAGAAATATAAAAGTAGTTCCATCTCAGTACATCTTGGAGAGATGGACCGAGCATGCAAGGTTGGGAAATCTTAGGGAGACTAGACAATGTAAAATGCAAGATAATCCTAAATTGGTTGTTGCAAGATGTTACAAAGATTTGTGCCACAGACTGCTCAAGTTATCAGCAAGAGCCTCTGAATCTATGGAGGCTTATCAATTTGCTGCGGGGCAAATTGATGAAGTGATGGTAGGAGTGGAGAAAATTTTGACATTAAAAATTGAGGGAGGTCAAGCTATCACCTCAAGTAATATTGATGCAAATGCTTCAGAAAATGAGTCTGCAGAGATCTTTCTGAATGGATATGCAATTGAAGATCAGGATGAAAGTAACAGAACAAATGGAGGAAAAGACAGGACGGCTACATCAGATAGGGACCTTCTAACAACTATGACTTGTAATGGAGGTGATTCTGATAGAATTTTGAATGTAGAAGTATCTCCACCAAATACTGTTGTCTGTATTTCAAGCCCCTCATCTGCATATGTTTCATCTCAGTCGGCAACACCAAATCCTATTCTGCAGGGTTTATACAGTTTTGAAGCCAATCAAGTGGTTCACTGCATGTATGAACAGCCTAATCTTGTGCTGGACCATCAATCTAATTCTAACATGTTACAACCGCCAAACTTCTTTTCTAACCAACAGGATTCTCCTGGTCAATCTCAACTATTGCAGGAGCCTATAATCCAGAGCACATACCATGAATCCATGCCAAGCAATAATCAGATGCGACAGGGGTTGAATCTTGACATCCAAAATCCACATTCGTCTTCATTCTTGCTGTATGACCATAGATACAGAAGTTCTGAGTCTGCATGA 2661 0.3871 MDEDRNELGTVHEGNVDIGHQTSNDLDLNVEQNCCSPNVAHANDIQSCPPSLANVVSAKTVLGIGSKFESDDHAYRFYNKYARLAGFNVRKDWINRSKVHGQVVSRKFTCSKEGYRRKDKRDVNVKKHRKETRTGCMAHMIVTRQPDGKYQVTHFEAQHNHDNINPNNANMLNLQNEFSVAQAVEADSNNRLGPKSKSALDMLNKKICARESLDQLSMNYDNYLHSARERDMSEGEAGRLLGYFQRQHFENPTFFYAIQLDLDDKVSNLFWADDNMVVDYDHFGDVICLDTTCRTNKDLRPFVQFLGVNHHKQVLIFAAAFLYDDSIESFNWLFRTFINAMSGKKPKAILTEQEVVIIEAVNTVLPDTNHCICVWQLYENTLKHLSHVVKNAESFANDLRRSIYDPKDEEEFTHAWEAMLEKFNLQQNEWLRWMYREREKWAVVFGRNTFFVDIKGFHLGEILSHNFRSYLNLDLDVVQFFKHFERVVDEQRYKEIEASDEMSRCLPRLMGNVILLKHASDIYTPRAFEVFQRAYEKSLNVLVNQHIRNGSLFEYKANTFGHTRQYSVTFNSSDDTVVCSCMKFERVGFLCSHALKVLDHRNIKVVPSQYILERWTEHARLGNLRETRQCKMQDNPKLVVARCYKDLCHRLLKLSARASESMEAYQFAAGQIDEVMVGVEKILTLKIEGGQAITSSNIDANASENESAEIFLNGYAIEDQDESNRTNGGKDRTATSDRDLLTTMTCNGGDSDRILNVEVSPPNTVVCISSPSSAYVSSQSATPNPILQGLYSFEANQVVHCMYEQPNLVLDHQSNSNMLQPPNFFSNQQDSPGQSQLLQEPIIQSTYHESMPSNNQMRQGLNLDIQNPHSSSFLLYDHRYRSSESA 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15213g00004 886 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 59 680 IPR031052 GO:0006355
Mupr15213g00004 886 Pfam MULE transposase domain 286 380 IPR018289 -
Mupr15213g00004 886 Pfam FAR1 DNA-binding domain 76 162 IPR004330 -
Mupr15213g00004 886 ProSiteProfiles Zinc finger SWIM-type profile. 566 602 IPR007527 GO:0008270
Mupr15213g00004 886 SMART 26again6 577 604 IPR006564 GO:0008270
Mupr15213g00004 886 Pfam SWIM zinc finger 579 602 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15213g00004 Mupr-Chr15213 15654 18693 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mupr15213g00004 MULE 9.4e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15213g00004 - K17604 gmx:100809803 1540.4