Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr15213g00003 ATGGGCTTTCTCCGGCGACTTTTCGGCGCCAAAAAACCCTCCGATTCTAAATCCGGCAAGACAAGATGGACCTTCCTCAAACACACCGTCAGGAACAAGTCACTCCCACCGCTACCGCCACCGCCACCCTCCGCCCTCTTTGATTCTTCAACTCCCTTGGACGCCAACAAGCATGCCATCGCCGTCGCCGCCGCTACCGCCGCCGTCGCTGAGGCCGCTCTCGCCGCAGCCCACGCCGCCGCGGAGGTCGTCAGACTCACAAGCGGTGGAGTCGCCGGGACTAGTACTACCACCAGGCCCACCGCCGCCGCAGCGCGTGTTATTCAGCTGCGGTGGCCGGAGGACACCGCCGCCGTTAAGATACAATCGGCATTCCGTGGTTACTTGGCAAGGAGGGCATTGAGAGCACTTAAAGCATTGGTGAAGTTGCAAGCATTGGTTAGGGGCCACATTGTGAGAAAGCAAAGTGCAGATATGCTGAGGCGCATGCAAACATTGGTGCGACTTCAGGCCCAGGCACGTGCAAGTCGTGCGCACTTGTCAGATAATACGCGTTCTTTCAAGTCTTCCCTTTTTCATTACCCTGTCCCTGAAGACTATGAGCACCCACCACGTGCGTCCAGTACAAAATTTGATGGATCTTCTATCCTTAAGAGATGTAGTTCCAATGCAAATTTTAGGAACGCTGTTGAGTCAGAACGAGCCCGGTTTGATTCGAATTGGTTAAAGCGTTGGATGGAATTAGATAACAAGTGCAGCCAAAGTGGATTGAAAAACGGACGCCCCGATGATGATAAGAGTGACAAGATTCTCGAAGTAGATACTTGGAGGCCACACTTCAAATCCCACGCACATTATTATCTGAGTTCTGATTATAACAATGAGAATGAGAACCTTATGACACATGAGTCTCCATCAAAACGTTCAACAAAGCCTCTAAACCAAAGTTTCTCGTCAAGGGAGGTGTTAAATCTAGGCTCTTTGAAGTTCCACAAAGGAAAAGAAGAAGCAACTTCAAGAACTGCTGACAATAGTCCACAAGCGTTTTCTGCCACGTCTGTGAATGCAAGTGGTGCAAGGAGGGGTCCCTTTACTCCTACCATGAGCGAGTGTTCCTGGGGTTTCTTCAGTGGCTACTCGGGTCACCCCAATTACATGGCCAATACTGAATCTTTTCGAGCTAAGGTTAGATCACAGAGTGCACCAAGACAAAGGCTAGAGTTTGACAGATACGGTTCCGCTAGGAAGCCCATTCAGGGTGTTTCTGACGTGGTGGGGCCCAATTCAGATTTAAGGAACAAGGTCTTACCTGCCTCTAACAGTGTGAACAAAATTGGGACTGCCAATTTAAGTTTCTTGTGTGTGGCATCAGTTGAGAAGTCTATTCCAGAAAACGGGTTCAGGCTACGAAATGGAACTGTGTCCTTGGATGCTCACCGCAGCCAGTTGAAATCAAGCGATTATATGAAGCTG 1473 0.5003 MGFLRRLFGAKKPSDSKSGKTRWTFLKHTVRNKSLPPLPPPPPSALFDSSTPLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSGGVAGTSTTTRPTAAAARVIQLRWPEDTAAVKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQSADMLRRMQTLVRLQAQARASRAHLSDNTRSFKSSLFHYPVPEDYEHPPRASSTKFDGSSILKRCSSNANFRNAVESERARFDSNWLKRWMELDNKCSQSGLKNGRPDDDKSDKILEVDTWRPHFKSHAHYYLSSDYNNENENLMTHESPSKRSTKPLNQSFSSREVLNLGSLKFHKGKEEATSRTADNSPQAFSATSVNASGARRGPFTPTMSECSWGFFSGYSGHPNYMANTESFRAKVRSQSAPRQRLEFDRYGSARKPIQGVSDVVGPNSDLRNKVLPASNSVNKIGTANLSFLCVASVEKSIPENGFRLRNGTVSLDAHRSQLKSSDYMKL 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr15213g00003 491 Pfam Protein of unknown function (DUF4005) 345 406 IPR025064 -
Mupr15213g00003 491 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 115 159 IPR027417 -
Mupr15213g00003 491 Gene3D - 114 166 - -
Mupr15213g00003 491 ProSiteProfiles IQ motif profile. 114 142 IPR000048 GO:0005515
Mupr15213g00003 491 MobiDBLite consensus disorder prediction 1 20 - -
Mupr15213g00003 491 SMART iq_5 113 135 IPR000048 GO:0005515
Mupr15213g00003 491 SMART iq_5 136 157 IPR000048 GO:0005515
Mupr15213g00003 491 ProSiteProfiles IQ motif profile. 138 165 IPR000048 GO:0005515
Mupr15213g00003 491 MobiDBLite consensus disorder prediction 332 361 - -
Mupr15213g00003 491 PANTHER IQ-DOMAIN 5-RELATED 22 421 - -
Mupr15213g00003 491 MobiDBLite consensus disorder prediction 340 361 - -
Mupr15213g00003 491 Pfam IQ calmodulin-binding motif 138 155 IPR000048 GO:0005515
Mupr15213g00003 491 Pfam IQ calmodulin-binding motif 117 135 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr15213g00003 Mupr-Chr15213 6466 12067 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr15213g00003 1 420 IQD Protein Family AT5G62070 46.241 4.37e-64 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr15213g00003 - - gmx:100783694 630.943